Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AL157884.1-201ENST00000424561 454 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 IGLV3-4-201ENST00000432300 244 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AC242426.1-201ENST00000435270 960 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 RPL6P30-201ENST00000443382 862 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 OR7E99P-201ENST00000505750 922 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 LDHAP1-201ENST00000509421 992 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AC006499.4-201ENST00000510947 694 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AC023389.2-201ENST00000580031 955 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 MIR4433B-201ENST00000581329 102 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 OR7E91P-202ENST00000642062 1198 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 HSPD1P9-201ENST00000420325 1636 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC123769.1-201ENST00000530992 3192 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AL133351.3-201ENST00000454998 193 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 IGKV3D-34-201ENST00000522638 302 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC022616.2-201ENST00000523185 300 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC079905.1-201ENST00000549280 475 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC007346.1-201ENST00000569208 867 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AP005136.2-201ENST00000583253 1049 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC008507.3-201ENST00000585753 472 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 OR7A8P-201ENST00000595427 913 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC108865.2-201ENST00000606881 432 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AC092266.1-201ENST00000610958 165 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AL080312.2-201ENST00000613001 630 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AL354854.1-201ENST00000455940 1363 ntBASIC5.66□□□□□ -1.5
CCDC71Q8IV32 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC71Q8IV32 AP001157.1-201ENST00000550837 2339 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC71Q8IV32 SNORD16-201ENST00000362803 99 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 SNORA51.9-201ENST00000384295 124 ntBASIC5.65□□□□□ -1.5
CCDC71Q8IV32 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms