Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC012146.2-201ENST00000576545 416 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 AL591167.1-201ENST00000607321 456 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC022106.1-201ENST00000612834 766 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 AL157762.1-201ENST00000619612 415 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC093671.1-201ENST00000624981 2929 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RAB43Q86YS6 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAB43Q86YS6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAB43Q86YS6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC020656.2-201ENST00000613291 5309 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RAB43Q86YS6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.77□□□□□ -1.48
RAB43Q86YS6 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.77□□□□□ -1.48
RAB43Q86YS6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AL157831.2-201ENST00000564681 3095 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 RN7SKP17-201ENST00000411242 351 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC245096.1-201ENST00000413104 546 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 AL354868.1-201ENST00000417077 482 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 RPL12P12-201ENST00000424633 501 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC009237.1-201ENST00000442127 744 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC005077.1-201ENST00000449226 375 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC097486.1-201ENST00000515331 210 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 RNA5SP434-201ENST00000516647 121 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC073488.3-201ENST00000631611 778 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 AC000095.2-202ENST00000637415 154 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 SAMM50P1-201ENST00000455403 1399 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 CASC19-260ENST00000641828 2001 ntBASIC5.77□□□□□ -1.49
RAB43Q86YS6 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAB43Q86YS6 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RAB43Q86YS6 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAB43Q86YS6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RAB43Q86YS6 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAB43Q86YS6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAB43Q86YS6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAB43Q86YS6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAB43Q86YS6 SHQ1P1-201ENST00000437111 1544 ntBASIC5.76□□□□□ -1.49
RAB43Q86YS6 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAB43Q86YS6 RNA5SP477-201ENST00000362639 119 ntBASIC5.76□□□□□ -1.49
RAB43Q86YS6 AL445238.1-204ENST00000400311 463 ntBASIC5.76□□□□□ -1.49
RAB43Q86YS6 AC092651.1-201ENST00000426110 312 ntBASIC5.76□□□□□ -1.49
RAB43Q86YS6 HSPE1P27-201ENST00000430808 296 ntBASIC5.76□□□□□ -1.49
RAB43Q86YS6 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAB43Q86YS6 AL590399.4-201ENST00000436561 601 ntBASIC5.76□□□□□ -1.49
RAB43Q86YS6 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.76□□□□□ -1.49
RAB43Q86YS6 AC016908.1-201ENST00000442571 1219 ntBASIC5.76□□□□□ -1.49
RAB43Q86YS6 FTLP8-201ENST00000446770 267 ntBASIC5.76□□□□□ -1.49
RAB43Q86YS6 CST12P-201ENST00000457644 362 ntBASIC5.76□□□□□ -1.49
RAB43Q86YS6 NXT1P1-201ENST00000458481 316 ntBASIC5.76□□□□□ -1.49
RAB43Q86YS6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.76□□□□□ -1.49
RAB43Q86YS6 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.76□□□□□ -1.49
RAB43Q86YS6 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms