Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 RNU6-746P-201ENST00000384112 109 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC096664.1-201ENST00000393996 778 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 AL121834.1-202ENST00000404494 277 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 RNA5SP265-201ENST00000411023 111 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 HMGB1P16-201ENST00000447155 540 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC073072.2-201ENST00000447425 348 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 TRBV8-1-201ENST00000481590 279 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 RN7SL862P-201ENST00000491550 298 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 GZMAP1-201ENST00000503054 631 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 MTCYBP40-201ENST00000509390 1135 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC108064.1-201ENST00000513791 460 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC093303.1-201ENST00000514549 295 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 RN7SKP295-201ENST00000517264 153 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 SSR2-215ENST00000529008 849 ntTSL 5 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 OR5D15P-201ENST00000531671 942 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC104046.1-201ENST00000559487 406 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC104687.2-201ENST00000604442 342 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AL356052.1-201ENST00000605764 376 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC016999.2-201ENST00000614692 556 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AC040978.1-201ENST00000617244 1282 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 AL683826.1-201ENST00000624104 627 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 AP002370.1-201ENST00000528055 1602 ntBASIC8.87□□□□□ -0.99
VARS2Q5ST30 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 MAPK6PS3-201ENST00000403865 2162 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 GOT2P1-201ENST00000440922 1309 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC010680.2-201ENST00000603521 2117 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 MIR595-201ENST00000384905 96 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 RNA5SP256-201ENST00000390978 113 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC023141.1-201ENST00000419418 379 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 ACTP1-201ENST00000440793 383 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 FUNDC2P4-201ENST00000441207 421 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 PSPC1P1-201ENST00000442352 665 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC132479.1-201ENST00000449160 144 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 AL135929.1-201ENST00000449287 552 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC083798.1-201ENST00000472671 131 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC068587.1-201ENST00000483613 781 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 RN7SL314P-201ENST00000490735 292 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms