Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 RN7SL544P-201ENST00000617232 284 ntBASIC5.64□□□□□ -1.51
CACNA1BQ00975 RN7SL763P-201ENST00000620922 284 ntBASIC5.64□□□□□ -1.51
CACNA1BQ00975 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CACNA1BQ00975 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CACNA1BQ00975 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC5.64□□□□□ -1.51
CACNA1BQ00975 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CACNA1BQ00975 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.64□□□□□ -1.51
CACNA1BQ00975 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CACNA1BQ00975 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.64□□□□□ -1.51
CACNA1BQ00975 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CACNA1BQ00975 RMST-210ENST00000640149 2844 ntTSL 5 BASIC5.64□□□□□ -1.51
CACNA1BQ00975 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CACNA1BQ00975 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CACNA1BQ00975 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CACNA1BQ00975 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CACNA1BQ00975 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.64□□□□□ -1.51
CACNA1BQ00975 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1BQ00975 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1BQ00975 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1BQ00975 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1BQ00975 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 RNA5SP171-201ENST00000391071 115 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 RNA5SP156-201ENST00000410250 110 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 PPIAP10-201ENST00000438675 458 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 SNORA43.3-201ENST00000517240 103 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 MIR4675-201ENST00000577898 77 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 EIF3FP1-201ENST00000613970 806 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1BQ00975 CASC19-260ENST00000641828 2001 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1BQ00975 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1BQ00975 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1BQ00975 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 RNA5SP479-201ENST00000364858 117 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 SLC35E1P1-201ENST00000419313 864 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 AC114755.4-201ENST00000439114 443 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 RPS3AP53-201ENST00000454716 778 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 RPS18P6-201ENST00000476880 458 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 AC026951.2-201ENST00000613847 241 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 MIR6780A-201ENST00000615089 68 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1BQ00975 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CACNA1BQ00975 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 AC022819.1-201ENST00000563495 3910 ntBASIC5.63□□□□□ -1.51
CACNA1BQ00975 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.63□□□□□ -1.51
CACNA1BQ00975 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 HSPA8P18-201ENST00000439846 1928 ntBASIC5.62□□□□□ -1.51
CACNA1BQ00975 AP002364.1-201ENST00000623330 3386 ntBASIC5.62□□□□□ -1.51
CACNA1BQ00975 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 RN7SKP104-201ENST00000362605 328 ntBASIC5.62□□□□□ -1.51
CACNA1BQ00975 CYCSP12-201ENST00000437729 300 ntBASIC5.62□□□□□ -1.51
CACNA1BQ00975 AC009237.1-201ENST00000442127 744 ntBASIC5.62□□□□□ -1.51
CACNA1BQ00975 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 MRPL57P1-201ENST00000621486 265 ntBASIC5.62□□□□□ -1.51
CACNA1BQ00975 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CACNA1BQ00975 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.62□□□□□ -1.51
CACNA1BQ00975 AC005294.1-201ENST00000355509 281 ntBASIC5.62□□□□□ -1.51
CACNA1BQ00975 RPL5P5-201ENST00000392009 893 ntBASIC5.62□□□□□ -1.51
CACNA1BQ00975 AL049697.3-201ENST00000406493 982 ntBASIC5.62□□□□□ -1.51
CACNA1BQ00975 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms