Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 AL121768.1-201ENST00000613917 2544 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HSPG2P98160 SNORA11F-201ENST00000408237 128 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC3.44□□□□□ -1.86
HSPG2P98160 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HSPG2P98160 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.44□□□□□ -1.86
HSPG2P98160 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.44□□□□□ -1.86
HSPG2P98160 MED28P3-201ENST00000444288 531 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 AC111000.3-201ENST00000508057 576 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HSPG2P98160 AL109766.1-201ENST00000555080 552 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 AC015660.5-201ENST00000623238 564 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
HSPG2P98160 AC105046.1-201ENST00000566457 4997 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 PKD1L2-203ENST00000525539 7379 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.44□□□□□ -1.86
HSPG2P98160 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC3.44□□□□□ -1.86
HSPG2P98160 OR13C1P-201ENST00000457612 963 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 RPL23AP72-201ENST00000492447 435 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC3.44□□□□□ -1.86
HSPG2P98160 IGHVIII-47-1-201ENST00000518187 331 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 SCARNA9-201ENST00000530422 353 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 NPM1P42-201ENST00000560329 862 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
HSPG2P98160 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 BX322650.1-201ENST00000332359 2143 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 RNU1-149P-201ENST00000390870 161 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 GAPDHP42-201ENST00000406848 981 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC3.44□□□□□ -1.86
HSPG2P98160 RPL12P28-201ENST00000430852 489 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 AC092106.1-201ENST00000444291 373 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC3.44□□□□□ -1.86
HSPG2P98160 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.44□□□□□ -1.86
HSPG2P98160 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.44□□□□□ -1.86
HSPG2P98160 AC112187.1-201ENST00000455837 479 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
HSPG2P98160 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC3.44□□□□□ -1.86
HSPG2P98160 AC005962.2-201ENST00000611427 652 ntBASIC3.44□□□□□ -1.86
HSPG2P98160 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HSPG2P98160 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HSPG2P98160 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
HSPG2P98160 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC3.43□□□□□ -1.86
HSPG2P98160 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HSPG2P98160 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HSPG2P98160 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.43□□□□□ -1.86
HSPG2P98160 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.43□□□□□ -1.86
HSPG2P98160 AC093655.2-201ENST00000425735 631 ntBASIC3.43□□□□□ -1.86
HSPG2P98160 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 MRPS33P2-201ENST00000507850 322 ntBASIC3.43□□□□□ -1.86
HSPG2P98160 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC3.43□□□□□ -1.86
HSPG2P98160 HMGB1P23-201ENST00000518743 568 ntBASIC3.43□□□□□ -1.86
HSPG2P98160 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.43□□□□□ -1.86
HSPG2P98160 MIR6716-201ENST00000613413 80 ntBASIC3.43□□□□□ -1.86
HSPG2P98160 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HSPG2P98160 AC116631.1-202ENST00000640984 683 ntBASIC3.43□□□□□ -1.86
HSPG2P98160 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC3.43□□□□□ -1.86
HSPG2P98160 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HSPG2P98160 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
HSPG2P98160 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms