Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC016542.2-201ENST00000624201 619 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNA1P78396 AL731556.1-201ENST00000394628 3711 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCNA1P78396 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCNA1P78396 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCNA1P78396 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
CCNA1P78396 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.83□□□□□ -1.32
CCNA1P78396 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCNA1P78396 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNA1P78396 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCNA1P78396 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CCNA1P78396 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNA1P78396 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNA1P78396 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNA1P78396 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNA1P78396 AC096921.2-201ENST00000561507 1916 ntBASIC6.82□□□□□ -1.32
CCNA1P78396 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CCNA1P78396 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNA1P78396 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCNA1P78396 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNA1P78396 SNORA64.1-201ENST00000362600 132 ntBASIC6.82□□□□□ -1.32
CCNA1P78396 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNA1P78396 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNA1P78396 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.82□□□□□ -1.32
CCNA1P78396 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNA1P78396 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNA1P78396 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNA1P78396 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNA1P78396 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.82□□□□□ -1.32
CCNA1P78396 BX510359.5-201ENST00000515651 304 ntBASIC6.82□□□□□ -1.32
CCNA1P78396 RN7SKP98-201ENST00000517070 156 ntBASIC6.82□□□□□ -1.32
CCNA1P78396 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.82□□□□□ -1.32
CCNA1P78396 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNA1P78396 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.82□□□□□ -1.32
CCNA1P78396 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNA1P78396 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.82□□□□□ -1.32
CCNA1P78396 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.82□□□□□ -1.32
CCNA1P78396 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNA1P78396 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNA1P78396 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNA1P78396 AC211433.2-201ENST00000608433 387 ntBASIC6.82□□□□□ -1.32
CCNA1P78396 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNA1P78396 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNA1P78396 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNA1P78396 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCNA1P78396 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNA1P78396 UGT2B27P-201ENST00000505092 1620 ntBASIC6.82□□□□□ -1.32
CCNA1P78396 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNA1P78396 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCNA1P78396 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CCNA1P78396 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCNA1P78396 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCNA1P78396 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
CCNA1P78396 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.81□□□□□ -1.32
CCNA1P78396 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.81□□□□□ -1.32
CCNA1P78396 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CCNA1P78396 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNA1P78396 OR9K1P-201ENST00000326513 941 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 NPM1P4-201ENST00000414095 812 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.81□□□□□ -1.32
CCNA1P78396 AL627308.1-201ENST00000435693 821 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 SPRYD7P1-201ENST00000443861 570 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 SIAH1P1-201ENST00000479411 923 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 AC006539.1-201ENST00000481419 501 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 AC022215.1-201ENST00000481770 362 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 AC108693.1-201ENST00000496068 432 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 DUTP7-201ENST00000507982 486 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.81□□□□□ -1.32
CCNA1P78396 OR4A42P-201ENST00000531397 938 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.81□□□□□ -1.32
CCNA1P78396 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.81□□□□□ -1.32
CCNA1P78396 MIR4260-201ENST00000583107 67 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.81□□□□□ -1.32
CCNA1P78396 AL021368.3-201ENST00000607119 578 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.81□□□□□ -1.32
CCNA1P78396 AL157762.1-201ENST00000619612 415 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 AL035661.1-201ENST00000620459 1144 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CCNA1P78396 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCNA1P78396 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCNA1P78396 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNA1P78396 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNA1P78396 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.81□□□□□ -1.32
CCNA1P78396 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNA1P78396 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNA1P78396 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNA1P78396 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
CCNA1P78396 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.81□□□□□ -1.32
CCNA1P78396 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CCNA1P78396 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.8□□□□□ -1.32
CCNA1P78396 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNA1P78396 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNA1P78396 AC008957.3-201ENST00000624112 2242 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCNA1P78396 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.8□□□□□ -1.32
CCNA1P78396 RNA5SP333-201ENST00000363466 118 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 RN7SKP162-201ENST00000363605 345 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms