Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 TBC1D3P7-201ENST00000428328 914 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 PRPS1P2-201ENST00000430496 937 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 RBM22P3-201ENST00000430648 954 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 AL354893.1-201ENST00000433735 348 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC105052.2-201ENST00000434317 794 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 HMGB3P10-201ENST00000434734 572 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 GAPDHP48-201ENST00000436626 961 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC016734.1-201ENST00000436998 654 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM258P61165 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.27□□□□□ -1.89
TMEM258P61165 SUMO2P1-206ENST00000445436 284 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC3.27□□□□□ -1.89
TMEM258P61165 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 FABP3P2-201ENST00000453169 399 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AL645939.1-201ENST00000453429 797 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC092042.1-201ENST00000457115 509 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC3.27□□□□□ -1.89
TMEM258P61165 EIF2S2P4-201ENST00000461070 984 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 WWTR1-IT1-201ENST00000463167 451 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 MYL6P4-201ENST00000477911 453 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 RN7SL817P-201ENST00000480777 288 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 RN7SL205P-201ENST00000490174 284 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC020890.1-201ENST00000491837 504 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC021146.11-201ENST00000503319 491 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 AC020593.1-201ENST00000507399 299 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC008417.1-201ENST00000510014 565 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC3.27□□□□□ -1.89
TMEM258P61165 CDC42P3-201ENST00000518493 633 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC105031.1-201ENST00000518550 476 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 AC087441.1-201ENST00000531069 301 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 HMGB1P42-201ENST00000532126 553 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 AC051619.8-201ENST00000563103 308 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 AC015674.1-201ENST00000578482 267 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 AL139395.1-201ENST00000603662 160 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AL021807.1-201ENST00000607175 565 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 AL365181.4-201ENST00000609800 547 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 uc_338.23-201ENST00000614169 164 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM258P61165 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 AC103858.2-201ENST00000621471 543 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AP002505.2-201ENST00000623585 696 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 AC073488.3-201ENST00000631611 778 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.27□□□□□ -1.89
TMEM258P61165 AC106774.10-201ENST00000638486 599 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TMEM258P61165 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 VPS35P1-201ENST00000563400 1518 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM258P61165 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM258P61165 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM258P61165 AC009220.2-201ENST00000489759 1751 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 AC008725.1-201ENST00000605123 2263 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM258P61165 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM258P61165 AC027088.4-201ENST00000611559 1947 ntBASIC3.27□□□□□ -1.89
TMEM258P61165 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM258P61165 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM258P61165 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.26□□□□□ -1.89
TMEM258P61165 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC3.26□□□□□ -1.89
TMEM258P61165 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC3.26□□□□□ -1.89
TMEM258P61165 LRRC37A15P-201ENST00000514785 1355 ntBASIC3.26□□□□□ -1.89
TMEM258P61165 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM258P61165 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM258P61165 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM258P61165 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM258P61165 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM258P61165 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM258P61165 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM258P61165 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC3.26□□□□□ -1.89
TMEM258P61165 RNU6-673P-201ENST00000365084 104 ntBASIC3.26□□□□□ -1.89
TMEM258P61165 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC3.26□□□□□ -1.89
TMEM258P61165 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC3.26□□□□□ -1.89
TMEM258P61165 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM258P61165 SNORA70.8-201ENST00000384231 136 ntBASIC3.26□□□□□ -1.89
TMEM258P61165 MIR93-201ENST00000385024 80 ntBASIC3.26□□□□□ -1.89
TMEM258P61165 AP000580.1-201ENST00000404439 358 ntBASIC3.26□□□□□ -1.89
TMEM258P61165 SNORD88A-201ENST00000408314 91 ntBASIC3.26□□□□□ -1.89
TMEM258P61165 AMD1P2-201ENST00000412936 992 ntBASIC3.26□□□□□ -1.89
TMEM258P61165 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.26□□□□□ -1.89
TMEM258P61165 LINC00316-201ENST00000416722 455 ntTSL 2 BASIC3.26□□□□□ -1.89
TMEM258P61165 AC020983.1-201ENST00000417063 543 ntBASIC3.26□□□□□ -1.89
TMEM258P61165 AL353705.3-201ENST00000418694 1250 ntBASIC3.26□□□□□ -1.89
TMEM258P61165 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TMEM258P61165 ATP5A1P8-201ENST00000423669 1291 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms