Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.63□□□□□ -1.35
GPC3P51654 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GPC3P51654 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.63□□□□□ -1.35
GPC3P51654 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.63□□□□□ -1.35
GPC3P51654 AP006222.1-205ENST00000450734 457 ntBASIC6.63□□□□□ -1.35
GPC3P51654 AC114982.2-201ENST00000461396 358 ntBASIC6.63□□□□□ -1.35
GPC3P51654 AC023245.1-201ENST00000468501 517 ntBASIC6.63□□□□□ -1.35
GPC3P51654 AL122020.1-201ENST00000472287 459 ntBASIC6.63□□□□□ -1.35
GPC3P51654 UBFD1P1-201ENST00000473259 814 ntBASIC6.63□□□□□ -1.35
GPC3P51654 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.63□□□□□ -1.35
GPC3P51654 AC068769.1-201ENST00000474767 2426 ntBASIC6.63□□□□□ -1.35
GPC3P51654 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.63□□□□□ -1.35
GPC3P51654 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.63□□□□□ -1.35
GPC3P51654 AC110056.1-201ENST00000525759 911 ntBASIC6.63□□□□□ -1.35
GPC3P51654 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GPC3P51654 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.63□□□□□ -1.35
GPC3P51654 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.63□□□□□ -1.35
GPC3P51654 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.63□□□□□ -1.35
GPC3P51654 AC012146.2-201ENST00000576545 416 ntBASIC6.63□□□□□ -1.35
GPC3P51654 RN7SL753P-201ENST00000581238 290 ntBASIC6.63□□□□□ -1.35
GPC3P51654 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
GPC3P51654 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GPC3P51654 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GPC3P51654 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
GPC3P51654 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.62□□□□□ -1.35
GPC3P51654 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
GPC3P51654 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.62□□□□□ -1.35
GPC3P51654 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
GPC3P51654 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
GPC3P51654 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
GPC3P51654 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
GPC3P51654 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
GPC3P51654 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
GPC3P51654 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.62□□□□□ -1.35
GPC3P51654 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
GPC3P51654 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
GPC3P51654 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
GPC3P51654 SNRPEP6-201ENST00000407465 277 ntBASIC6.62□□□□□ -1.35
GPC3P51654 KIF4CP-201ENST00000422742 1279 ntBASIC6.62□□□□□ -1.35
GPC3P51654 AC016027.5-201ENST00000427227 210 ntBASIC6.62□□□□□ -1.35
GPC3P51654 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.62□□□□□ -1.35
GPC3P51654 TUBB4BP6-201ENST00000437576 479 ntBASIC6.62□□□□□ -1.35
GPC3P51654 AL512637.1-201ENST00000439523 1231 ntBASIC6.62□□□□□ -1.35
GPC3P51654 BMS1P10-201ENST00000443754 1120 ntBASIC6.62□□□□□ -1.35
GPC3P51654 RPL23AP60-201ENST00000450011 454 ntBASIC6.62□□□□□ -1.35
GPC3P51654 PPIAP19-201ENST00000486414 492 ntBASIC6.62□□□□□ -1.35
GPC3P51654 AC083795.1-201ENST00000491760 320 ntBASIC6.62□□□□□ -1.35
GPC3P51654 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
GPC3P51654 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.62□□□□□ -1.35
GPC3P51654 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
GPC3P51654 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.62□□□□□ -1.35
GPC3P51654 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.62□□□□□ -1.35
GPC3P51654 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.62□□□□□ -1.35
GPC3P51654 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.62□□□□□ -1.35
GPC3P51654 AC119403.2-201ENST00000590960 598 ntBASIC6.62□□□□□ -1.35
GPC3P51654 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.62□□□□□ -1.35
GPC3P51654 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.62□□□□□ -1.35
GPC3P51654 AL021918.2-201ENST00000613415 194 ntBASIC6.62□□□□□ -1.35
GPC3P51654 AL352984.2-202ENST00000613699 155 ntBASIC6.62□□□□□ -1.35
GPC3P51654 MIR6729-201ENST00000618194 65 ntBASIC6.62□□□□□ -1.35
GPC3P51654 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.62□□□□□ -1.35
GPC3P51654 AC021422.1-201ENST00000621212 473 ntBASIC6.62□□□□□ -1.35
GPC3P51654 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.62□□□□□ -1.35
GPC3P51654 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.62□□□□□ -1.35
GPC3P51654 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.62□□□□□ -1.35
GPC3P51654 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.62□□□□□ -1.35
GPC3P51654 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.62□□□□□ -1.35
GPC3P51654 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.62□□□□□ -1.35
GPC3P51654 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.62□□□□□ -1.35
GPC3P51654 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.61□□□□□ -1.35
GPC3P51654 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GPC3P51654 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GPC3P51654 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
GPC3P51654 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.61□□□□□ -1.35
GPC3P51654 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
GPC3P51654 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
GPC3P51654 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
GPC3P51654 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.61□□□□□ -1.35
GPC3P51654 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GPC3P51654 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GPC3P51654 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GPC3P51654 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GPC3P51654 SELENOWP1-201ENST00000322792 252 ntBASIC6.61□□□□□ -1.35
GPC3P51654 OR10R3P-201ENST00000361688 942 ntBASIC6.61□□□□□ -1.35
GPC3P51654 RN7SKP69-201ENST00000365390 305 ntBASIC6.61□□□□□ -1.35
GPC3P51654 RN7SKP292-201ENST00000365522 317 ntBASIC6.61□□□□□ -1.35
GPC3P51654 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.61□□□□□ -1.35
GPC3P51654 SNORA17A-201ENST00000391185 133 ntBASIC6.61□□□□□ -1.35
GPC3P51654 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.61□□□□□ -1.35
GPC3P51654 PTCD2P2-201ENST00000415579 1095 ntBASIC6.61□□□□□ -1.35
GPC3P51654 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.61□□□□□ -1.35
GPC3P51654 NMD3P2-201ENST00000421815 761 ntBASIC6.61□□□□□ -1.35
GPC3P51654 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.61□□□□□ -1.35
GPC3P51654 RPSAP41-201ENST00000439695 860 ntBASIC6.61□□□□□ -1.35
GPC3P51654 AL391987.1-201ENST00000441025 200 ntBASIC6.61□□□□□ -1.35
GPC3P51654 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
GPC3P51654 RPL31P15-201ENST00000449770 338 ntBASIC6.61□□□□□ -1.35
GPC3P51654 PPIAP20-201ENST00000449839 135 ntBASIC6.61□□□□□ -1.35
GPC3P51654 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.61□□□□□ -1.35
GPC3P51654 RAB28P2-201ENST00000454299 641 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms