Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF144AP50876 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF144AP50876 TARS2P1-201ENST00000506124 2041 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF144AP50876 AP001157.1-201ENST00000550837 2339 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.44□□□□□ -1.22
RNF144AP50876 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF144AP50876 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF144AP50876 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RNF144AP50876 Y_RNA.58-201ENST00000362807 102 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 Y_RNA.154-201ENST00000363624 102 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 RNY3P1-201ENST00000365085 102 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 RN7SKP208-201ENST00000365474 361 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 RNY3-201ENST00000365484 102 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RNF144AP50876 OR2T4-202ENST00000366475 1047 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF144AP50876 Y_RNA.490-201ENST00000384413 102 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 MIR525-201ENST00000384978 85 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RNF144AP50876 HIST1H2BPS2-201ENST00000402707 340 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 ERMN-204ENST00000409925 556 ntTSL 4 BASIC7.44□□□□□ -1.22
RNF144AP50876 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF144AP50876 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF144AP50876 AL773545.3-201ENST00000414297 706 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 RPS7P8-201ENST00000418311 581 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC7.44□□□□□ -1.22
RNF144AP50876 AL157884.1-201ENST00000424561 454 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF144AP50876 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 PSMD8P1-201ENST00000436275 769 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AC002366.1-201ENST00000446186 1190 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF144AP50876 SNRPGP6-201ENST00000451124 220 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AC092569.1-201ENST00000455192 258 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF144AP50876 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF144AP50876 AC226119.2-201ENST00000513501 530 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 RN7SKP190-201ENST00000516079 286 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 SNORA18.6-201ENST00000516792 115 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF144AP50876 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF144AP50876 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF144AP50876 AC016954.1-201ENST00000549976 745 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF144AP50876 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 AC007151.1-201ENST00000572774 483 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 MIR3668-201ENST00000582138 75 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 MIR4314-201ENST00000583321 92 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF144AP50876 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.44□□□□□ -1.22
RNF144AP50876 AL390838.2-201ENST00000602394 274 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AC010200.2-201ENST00000605098 235 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AC004890.3-201ENST00000605566 1095 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AC084876.1-201ENST00000612793 641 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AL122125.1-201ENST00000616999 600 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF144AP50876 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC7.44□□□□□ -1.22
RNF144AP50876 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF144AP50876 AC087203.2-201ENST00000526502 1587 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.44□□□□□ -1.22
RNF144AP50876 DCAF13P1-201ENST00000495256 1330 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF144AP50876 BRD7P1-201ENST00000557705 1915 ntBASIC7.44□□□□□ -1.22
RNF144AP50876 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF144AP50876 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF144AP50876 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF144AP50876 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF144AP50876 RERE-203ENST00000400907 2973 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF144AP50876 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
RNF144AP50876 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.43□□□□□ -1.22
RNF144AP50876 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RNF144AP50876 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RNF144AP50876 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF144AP50876 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF144AP50876 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RNF144AP50876 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.43□□□□□ -1.22
RNF144AP50876 AC009948.5-201ENST00000624360 4406 ntBASIC7.43□□□□□ -1.22
RNF144AP50876 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF144AP50876 AL449283.1-201ENST00000602631 3403 ntBASIC7.43□□□□□ -1.22
RNF144AP50876 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF144AP50876 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RNF144AP50876 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF144AP50876 RNU6-483P-201ENST00000384088 108 ntBASIC7.43□□□□□ -1.22
RNF144AP50876 MIR606-201ENST00000384851 96 ntBASIC7.43□□□□□ -1.22
RNF144AP50876 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RNF144AP50876 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.43□□□□□ -1.22
RNF144AP50876 RSU1P3-201ENST00000412878 835 ntBASIC7.43□□□□□ -1.22
RNF144AP50876 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms