Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSR1P43307 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSR1P43307 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.45□□□□□ -1.38
SSR1P43307 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.44□□□□□ -1.38
SSR1P43307 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSR1P43307 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSR1P43307 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.44□□□□□ -1.38
SSR1P43307 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSR1P43307 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSR1P43307 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.44□□□□□ -1.38
SSR1P43307 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSR1P43307 PSMA6P1-201ENST00000400275 741 ntBASIC6.44□□□□□ -1.38
SSR1P43307 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSR1P43307 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.44□□□□□ -1.38
SSR1P43307 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.44□□□□□ -1.38
SSR1P43307 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.44□□□□□ -1.38
SSR1P43307 AC094019.1-201ENST00000434678 472 ntBASIC6.44□□□□□ -1.38
SSR1P43307 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.44□□□□□ -1.38
SSR1P43307 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.44□□□□□ -1.38
SSR1P43307 HIGD1AP16-201ENST00000450986 258 ntBASIC6.44□□□□□ -1.38
SSR1P43307 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.44□□□□□ -1.38
SSR1P43307 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.44□□□□□ -1.38
SSR1P43307 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.44□□□□□ -1.38
SSR1P43307 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.44□□□□□ -1.38
SSR1P43307 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.44□□□□□ -1.38
SSR1P43307 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.44□□□□□ -1.38
SSR1P43307 KHDC1P1-201ENST00000511053 508 ntBASIC6.44□□□□□ -1.38
SSR1P43307 MRPS5P3-201ENST00000515577 166 ntBASIC6.44□□□□□ -1.38
SSR1P43307 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.44□□□□□ -1.38
SSR1P43307 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.44□□□□□ -1.38
SSR1P43307 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSR1P43307 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.44□□□□□ -1.38
SSR1P43307 AC004890.3-201ENST00000605566 1095 ntBASIC6.44□□□□□ -1.38
SSR1P43307 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
SSR1P43307 AC015660.5-201ENST00000623238 564 ntBASIC6.44□□□□□ -1.38
SSR1P43307 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.44□□□□□ -1.38
SSR1P43307 AL359955.1-201ENST00000455242 3275 ntBASIC6.44□□□□□ -1.38
SSR1P43307 AL022311.1-201ENST00000623726 19416 ntBASIC6.44□□□□□ -1.38
SSR1P43307 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSR1P43307 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSR1P43307 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.44□□□□□ -1.38
SSR1P43307 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
SSR1P43307 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSR1P43307 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSR1P43307 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSR1P43307 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SSR1P43307 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSR1P43307 AL121835.1-201ENST00000404250 354 ntBASIC6.43□□□□□ -1.38
SSR1P43307 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 RPS7P8-201ENST00000418311 581 ntBASIC6.43□□□□□ -1.38
SSR1P43307 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.43□□□□□ -1.38
SSR1P43307 RPL12P49-201ENST00000441100 121 ntBASIC6.43□□□□□ -1.38
SSR1P43307 AL356121.1-201ENST00000442911 156 ntBASIC6.43□□□□□ -1.38
SSR1P43307 AC099670.1-201ENST00000455141 783 ntBASIC6.43□□□□□ -1.38
SSR1P43307 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 RN7SL104P-201ENST00000498686 293 ntBASIC6.43□□□□□ -1.38
SSR1P43307 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.43□□□□□ -1.38
SSR1P43307 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.43□□□□□ -1.38
SSR1P43307 AC005632.2-201ENST00000564271 828 ntBASIC6.43□□□□□ -1.38
SSR1P43307 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSR1P43307 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.43□□□□□ -1.38
SSR1P43307 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.43□□□□□ -1.38
SSR1P43307 AC011891.2-201ENST00000604949 397 ntBASIC6.43□□□□□ -1.38
SSR1P43307 AC008555.7-201ENST00000605008 583 ntBASIC6.43□□□□□ -1.38
SSR1P43307 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.43□□□□□ -1.38
SSR1P43307 AL591167.1-201ENST00000607321 456 ntBASIC6.43□□□□□ -1.38
SSR1P43307 RN7SL261P-201ENST00000613441 282 ntBASIC6.43□□□□□ -1.38
SSR1P43307 AC069234.4-201ENST00000621276 412 ntBASIC6.43□□□□□ -1.38
SSR1P43307 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.43□□□□□ -1.38
SSR1P43307 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
SSR1P43307 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSR1P43307 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSR1P43307 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.43□□□□□ -1.38
SSR1P43307 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
SSR1P43307 AC003985.2-201ENST00000562268 1669 ntBASIC6.42□□□□□ -1.38
SSR1P43307 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSR1P43307 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSR1P43307 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
SSR1P43307 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.42□□□□□ -1.38
SSR1P43307 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSR1P43307 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.42□□□□□ -1.38
SSR1P43307 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
SSR1P43307 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSR1P43307 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSR1P43307 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.42□□□□□ -1.38
SSR1P43307 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SSR1P43307 RPL23AP17-201ENST00000401064 499 ntBASIC6.42□□□□□ -1.38
SSR1P43307 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms