Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC113398.2-201ENST00000507630 558 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC8.39□□□□□ -1.07
RXRBP28702 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC8.39□□□□□ -1.07
RXRBP28702 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 AL356057.1-201ENST00000533798 831 ntBASIC8.39□□□□□ -1.07
RXRBP28702 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC8.39□□□□□ -1.07
RXRBP28702 OR4U1P-201ENST00000554958 912 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.39□□□□□ -1.07
RXRBP28702 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 AC005332.4-201ENST00000592752 579 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AC068620.3-201ENST00000602749 560 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AC027334.1-201ENST00000603257 310 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AC069431.2-201ENST00000604149 1099 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AL365400.2-201ENST00000605604 902 ntBASIC8.39□□□□□ -1.07
RXRBP28702 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC8.39□□□□□ -1.07
RXRBP28702 AC231759.1-201ENST00000616455 597 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
RXRBP28702 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RXRBP28702 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
RXRBP28702 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RXRBP28702 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RXRBP28702 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
RXRBP28702 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RXRBP28702 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RXRBP28702 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 MTND5P12-201ENST00000502851 1449 ntBASIC8.38□□□□□ -1.07
RXRBP28702 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RXRBP28702 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
RXRBP28702 AC074141.1-201ENST00000588129 2995 ntBASIC8.38□□□□□ -1.07
RXRBP28702 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.38□□□□□ -1.07
RXRBP28702 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.38□□□□□ -1.07
RXRBP28702 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.38□□□□□ -1.07
RXRBP28702 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
RXRBP28702 MAPK10-377ENST00000642006 2752 ntBASIC8.38□□□□□ -1.07
RXRBP28702 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.38□□□□□ -1.07
RXRBP28702 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC8.38□□□□□ -1.07
RXRBP28702 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RXRBP28702 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 RNA5SP46-201ENST00000362370 120 ntBASIC8.38□□□□□ -1.07
RXRBP28702 RN7SKP62-201ENST00000384539 329 ntBASIC8.38□□□□□ -1.07
RXRBP28702 MIR141-201ENST00000384975 95 ntBASIC8.38□□□□□ -1.07
RXRBP28702 MIR23A-201ENST00000385245 73 ntBASIC8.38□□□□□ -1.07
RXRBP28702 AL391422.1-201ENST00000402155 436 ntBASIC8.38□□□□□ -1.07
RXRBP28702 RN7SKP182-201ENST00000410772 298 ntBASIC8.38□□□□□ -1.07
RXRBP28702 AL592310.1-201ENST00000414330 671 ntBASIC8.38□□□□□ -1.07
RXRBP28702 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RXRBP28702 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.38□□□□□ -1.07
RXRBP28702 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 AC009220.1-201ENST00000451614 275 ntBASIC8.38□□□□□ -1.07
RXRBP28702 SNORD11.1-201ENST00000459482 85 ntBASIC8.38□□□□□ -1.07
RXRBP28702 AL122020.1-201ENST00000472287 459 ntBASIC8.38□□□□□ -1.07
RXRBP28702 AC092865.4-201ENST00000477936 615 ntBASIC8.38□□□□□ -1.07
RXRBP28702 AC093890.1-201ENST00000502554 540 ntBASIC8.38□□□□□ -1.07
RXRBP28702 AC090958.1-201ENST00000511122 351 ntBASIC8.38□□□□□ -1.07
RXRBP28702 AC011352.1-201ENST00000512300 793 ntBASIC8.38□□□□□ -1.07
RXRBP28702 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC8.38□□□□□ -1.07
RXRBP28702 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC8.38□□□□□ -1.07
RXRBP28702 AC084337.1-201ENST00000524809 686 ntBASIC8.38□□□□□ -1.07
RXRBP28702 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC8.38□□□□□ -1.07
RXRBP28702 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RXRBP28702 HMGN2P6-201ENST00000551091 273 ntBASIC8.38□□□□□ -1.07
RXRBP28702 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC8.38□□□□□ -1.07
RXRBP28702 AC106785.4-201ENST00000569492 412 ntBASIC8.38□□□□□ -1.07
RXRBP28702 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RXRBP28702 AL513548.2-201ENST00000602994 1207 ntBASIC8.38□□□□□ -1.07
RXRBP28702 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 AC010480.1-201ENST00000624823 684 ntBASIC8.38□□□□□ -1.07
RXRBP28702 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
RXRBP28702 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC8.38□□□□□ -1.07
RXRBP28702 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RXRBP28702 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
RXRBP28702 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RXRBP28702 MAPK10-383ENST00000642032 3390 ntBASIC8.38□□□□□ -1.07
RXRBP28702 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.37□□□□□ -1.07
RXRBP28702 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RXRBP28702 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RXRBP28702 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RXRBP28702 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RXRBP28702 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.37□□□□□ -1.07
RXRBP28702 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.37□□□□□ -1.07
RXRBP28702 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms