Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RN7SL160P-201ENST00000468558 284 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 RN7SL568P-201ENST00000493069 298 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.98□□□□□ -1.13
ERCC3P19447 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC7.98□□□□□ -1.13
ERCC3P19447 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC7.98□□□□□ -1.13
ERCC3P19447 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC7.98□□□□□ -1.13
ERCC3P19447 SNORA3.4-201ENST00000515969 96 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 AC007537.1-201ENST00000539347 327 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.98□□□□□ -1.13
ERCC3P19447 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.98□□□□□ -1.13
ERCC3P19447 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.98□□□□□ -1.13
ERCC3P19447 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC7.98□□□□□ -1.13
ERCC3P19447 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.98□□□□□ -1.13
ERCC3P19447 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.98□□□□□ -1.13
ERCC3P19447 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.98□□□□□ -1.13
ERCC3P19447 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC7.98□□□□□ -1.13
ERCC3P19447 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 MROH3P-201ENST00000435735 2676 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 TPTE2P2-201ENST00000403471 1466 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 AC217777.1-201ENST00000570034 1471 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.98□□□□□ -1.13
ERCC3P19447 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.98□□□□□ -1.13
ERCC3P19447 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 AC011503.2-201ENST00000594230 1500 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.98□□□□□ -1.13
ERCC3P19447 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.98□□□□□ -1.13
ERCC3P19447 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
ERCC3P19447 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.97□□□□□ -1.13
ERCC3P19447 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.97□□□□□ -1.13
ERCC3P19447 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.97□□□□□ -1.13
ERCC3P19447 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
ERCC3P19447 SNORA64.3-201ENST00000365647 134 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.97□□□□□ -1.13
ERCC3P19447 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 AC006511.2-201ENST00000388966 660 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AC019178.1-201ENST00000392337 440 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.97□□□□□ -1.13
ERCC3P19447 HMGB3P18-201ENST00000406327 590 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.97□□□□□ -1.13
ERCC3P19447 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.97□□□□□ -1.13
ERCC3P19447 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC7.97□□□□□ -1.13
ERCC3P19447 HMGB1P49-201ENST00000418882 569 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 THEM7P-201ENST00000419556 672 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AL513175.2-201ENST00000422071 443 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.97□□□□□ -1.13
ERCC3P19447 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 NPM1P23-201ENST00000440193 849 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AC245291.3-201ENST00000443400 292 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.97□□□□□ -1.13
ERCC3P19447 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC7.97□□□□□ -1.13
ERCC3P19447 HMGB3P6-201ENST00000444896 598 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.97□□□□□ -1.13
ERCC3P19447 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.97□□□□□ -1.13
ERCC3P19447 RNA5SP116-201ENST00000516132 98 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.97□□□□□ -1.13
ERCC3P19447 OR4A6P-201ENST00000534364 970 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AC244502.2-201ENST00000543361 851 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AC008126.1-201ENST00000549019 480 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC7.97□□□□□ -1.13
ERCC3P19447 ACTG1P15-201ENST00000570019 1063 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC7.97□□□□□ -1.13
ERCC3P19447 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.97□□□□□ -1.13
ERCC3P19447 Z94722.1-201ENST00000604328 474 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 AC005514.1-201ENST00000623521 208 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AC024023.1-201ENST00000624530 922 ntBASIC7.97□□□□□ -1.13
ERCC3P19447 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.97□□□□□ -1.13
ERCC3P19447 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.97□□□□□ -1.13
ERCC3P19447 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.97□□□□□ -1.13
ERCC3P19447 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ERCC3P19447 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
ERCC3P19447 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
ERCC3P19447 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.96□□□□□ -1.13
ERCC3P19447 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
ERCC3P19447 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
ERCC3P19447 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
ERCC3P19447 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
ERCC3P19447 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.96□□□□□ -1.13
ERCC3P19447 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
ERCC3P19447 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.96□□□□□ -1.14
ERCC3P19447 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
ERCC3P19447 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms