Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.24□□□□□ -1.57
UBCP0CG48 AC013268.2-201ENST00000420753 337 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 RPL12P12-201ENST00000424633 501 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.24□□□□□ -1.57
UBCP0CG48 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.24□□□□□ -1.57
UBCP0CG48 PSMD8P1-201ENST00000436275 769 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 AC016027.4-201ENST00000450866 277 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.24□□□□□ -1.57
UBCP0CG48 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.24□□□□□ -1.57
UBCP0CG48 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.24□□□□□ -1.57
UBCP0CG48 AC083795.1-201ENST00000491760 320 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.24□□□□□ -1.57
UBCP0CG48 AC122714.1-201ENST00000502510 459 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.24□□□□□ -1.57
UBCP0CG48 SNORA74.1-201ENST00000516320 180 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 RNA5SP434-201ENST00000516647 121 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
UBCP0CG48 AC021269.1-201ENST00000526860 705 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 OR4A42P-201ENST00000531397 938 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.24□□□□□ -1.57
UBCP0CG48 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.24□□□□□ -1.57
UBCP0CG48 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UBCP0CG48 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.24□□□□□ -1.57
UBCP0CG48 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.24□□□□□ -1.57
UBCP0CG48 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.24□□□□□ -1.57
UBCP0CG48 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.24□□□□□ -1.57
UBCP0CG48 SNX18P12-201ENST00000624821 759 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.24□□□□□ -1.57
UBCP0CG48 AC079776.5-201ENST00000641920 211 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UBCP0CG48 AC130304.1-201ENST00000622942 2385 ntBASIC5.24□□□□□ -1.57
UBCP0CG48 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.24□□□□□ -1.57
UBCP0CG48 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.24□□□□□ -1.57
UBCP0CG48 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.24□□□□□ -1.57
UBCP0CG48 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.24□□□□□ -1.57
UBCP0CG48 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UBCP0CG48 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
UBCP0CG48 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.24□□□□□ -1.57
UBCP0CG48 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UBCP0CG48 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UBCP0CG48 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
UBCP0CG48 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.23□□□□□ -1.57
UBCP0CG48 AC004076.2-201ENST00000620532 3323 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
UBCP0CG48 AC005005.4-201ENST00000623789 16698 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 RPL11P3-201ENST00000395256 523 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.23□□□□□ -1.57
UBCP0CG48 NMD3P2-201ENST00000421815 761 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.23□□□□□ -1.57
UBCP0CG48 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.23□□□□□ -1.57
UBCP0CG48 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
UBCP0CG48 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.23□□□□□ -1.57
UBCP0CG48 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.23□□□□□ -1.57
UBCP0CG48 RSU1P1-201ENST00000453416 441 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 RPS4XP17-201ENST00000479057 754 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.23□□□□□ -1.57
UBCP0CG48 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.23□□□□□ -1.57
UBCP0CG48 AC095052.1-201ENST00000509955 863 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 AC090774.2-201ENST00000584708 322 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 MIR212-201ENST00000586026 110 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 AC060780.2-201ENST00000589047 198 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.23□□□□□ -1.57
UBCP0CG48 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.23□□□□□ -1.57
UBCP0CG48 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.23□□□□□ -1.57
UBCP0CG48 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.23□□□□□ -1.57
UBCP0CG48 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.23□□□□□ -1.57
UBCP0CG48 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.23□□□□□ -1.57
UBCP0CG48 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 AC114774.1-201ENST00000507410 1770 ntBASIC5.23□□□□□ -1.57
UBCP0CG48 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.23□□□□□ -1.57
UBCP0CG48 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.23□□□□□ -1.57
UBCP0CG48 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
UBCP0CG48 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UBCP0CG48 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.23□□□□□ -1.57
UBCP0CG48 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.22□□□□□ -1.57
UBCP0CG48 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBCP0CG48 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
UBCP0CG48 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UBCP0CG48 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
UBCP0CG48 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
UBCP0CG48 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBCP0CG48 AC093909.5-201ENST00000621839 1799 ntBASIC5.22□□□□□ -1.57
UBCP0CG48 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
UBCP0CG48 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
UBCP0CG48 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.22□□□□□ -1.57
UBCP0CG48 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.22□□□□□ -1.57
UBCP0CG48 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.22□□□□□ -1.57
UBCP0CG48 AP005432.1-201ENST00000580891 3485 ntBASIC5.22□□□□□ -1.57
UBCP0CG48 TCP11X1-202ENST00000622971 1372 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms