Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.02□□□□□ -1.29
COL1A1P02452 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL1A1P02452 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.02□□□□□ -1.29
COL1A1P02452 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL1A1P02452 AL049634.1-201ENST00000453770 1720 ntBASIC7.02□□□□□ -1.29
COL1A1P02452 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL1A1P02452 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL1A1P02452 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
COL1A1P02452 CR383656.5-201ENST00000547616 1340 ntBASIC7.02□□□□□ -1.29
COL1A1P02452 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL1A1P02452 RNA5SP30-201ENST00000365552 115 ntBASIC7.02□□□□□ -1.29
COL1A1P02452 SNORA70H-201ENST00000383910 135 ntBASIC7.02□□□□□ -1.29
COL1A1P02452 SNORA70J-201ENST00000384182 135 ntBASIC7.02□□□□□ -1.29
COL1A1P02452 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.02□□□□□ -1.29
COL1A1P02452 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.02□□□□□ -1.29
COL1A1P02452 AL603882.1-201ENST00000463059 681 ntBASIC7.02□□□□□ -1.29
COL1A1P02452 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL1A1P02452 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.02□□□□□ -1.29
COL1A1P02452 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.02□□□□□ -1.29
COL1A1P02452 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.02□□□□□ -1.29
COL1A1P02452 AC092944.2-201ENST00000605443 889 ntBASIC7.02□□□□□ -1.29
COL1A1P02452 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.02□□□□□ -1.29
COL1A1P02452 LINC02035-201ENST00000610128 5476 ntBASIC7.02□□□□□ -1.29
COL1A1P02452 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.02□□□□□ -1.29
COL1A1P02452 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL1A1P02452 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL1A1P02452 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL1A1P02452 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.02□□□□□ -1.29
COL1A1P02452 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
COL1A1P02452 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.02□□□□□ -1.29
COL1A1P02452 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.01□□□□□ -1.29
COL1A1P02452 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.01□□□□□ -1.29
COL1A1P02452 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.01□□□□□ -1.29
COL1A1P02452 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 AC005224.3-201ENST00000584683 2140 ntBASIC7.01□□□□□ -1.29
COL1A1P02452 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.01□□□□□ -1.29
COL1A1P02452 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.01□□□□□ -1.29
COL1A1P02452 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL1A1P02452 SNORA70-201ENST00000384436 135 ntBASIC7.01□□□□□ -1.29
COL1A1P02452 MIR130A-201ENST00000385274 89 ntBASIC7.01□□□□□ -1.29
COL1A1P02452 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.01□□□□□ -1.29
COL1A1P02452 OR6E1P-201ENST00000414424 923 ntBASIC7.01□□□□□ -1.29
COL1A1P02452 NENFP1-201ENST00000419476 466 ntBASIC7.01□□□□□ -1.29
COL1A1P02452 NANOGP4-201ENST00000427230 913 ntBASIC7.01□□□□□ -1.29
COL1A1P02452 CFL1P1-202ENST00000432948 411 ntBASIC7.01□□□□□ -1.29
COL1A1P02452 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.01□□□□□ -1.29
COL1A1P02452 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.01□□□□□ -1.29
COL1A1P02452 RPL17P2-201ENST00000491913 451 ntBASIC7.01□□□□□ -1.29
COL1A1P02452 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.01□□□□□ -1.29
COL1A1P02452 AL049872.1-201ENST00000556323 322 ntBASIC7.01□□□□□ -1.29
COL1A1P02452 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.01□□□□□ -1.29
COL1A1P02452 AC007204.2-201ENST00000615022 616 ntBASIC7.01□□□□□ -1.29
COL1A1P02452 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
COL1A1P02452 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.01□□□□□ -1.29
COL1A1P02452 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL1A1P02452 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
COL1A1P02452 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
COL1A1P02452 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7□□□□□ -1.29
COL1A1P02452 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
COL1A1P02452 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7□□□□□ -1.29
COL1A1P02452 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7□□□□□ -1.29
COL1A1P02452 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL1A1P02452 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7□□□□□ -1.29
COL1A1P02452 MIR1286-201ENST00000408112 78 ntBASIC7□□□□□ -1.29
COL1A1P02452 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7□□□□□ -1.29
COL1A1P02452 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7□□□□□ -1.29
COL1A1P02452 AC012075.1-201ENST00000436549 580 ntBASIC7□□□□□ -1.29
COL1A1P02452 AL390119.1-201ENST00000440329 312 ntBASIC7□□□□□ -1.29
COL1A1P02452 RN7SL583P-201ENST00000475692 287 ntBASIC7□□□□□ -1.29
COL1A1P02452 SCARNA6.1-201ENST00000516989 238 ntBASIC7□□□□□ -1.29
COL1A1P02452 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7□□□□□ -1.29
COL1A1P02452 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7□□□□□ -1.29
COL1A1P02452 AC096996.1-201ENST00000563813 325 ntBASIC7□□□□□ -1.29
COL1A1P02452 AL136295.6-201ENST00000610486 658 ntBASIC7□□□□□ -1.29
COL1A1P02452 AC021766.1-201ENST00000624404 741 ntBASIC7□□□□□ -1.29
COL1A1P02452 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7□□□□□ -1.29
COL1A1P02452 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL1A1P02452 AL161756.3-201ENST00000641216 2071 ntBASIC7□□□□□ -1.29
COL1A1P02452 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL1A1P02452 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL1A1P02452 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL1A1P02452 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
COL1A1P02452 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL1A1P02452 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
COL1A1P02452 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
COL1A1P02452 IMMTP1-201ENST00000435590 2219 ntBASIC7□□□□□ -1.29
COL1A1P02452 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL1A1P02452 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL1A1P02452 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
COL1A1P02452 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms