Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SMAD6O43541 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SMAD6O43541 AC079753.1-201ENST00000623243 3868 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
SMAD6O43541 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.14□□□□□ -1.43
SMAD6O43541 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SMAD6O43541 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
SMAD6O43541 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.14□□□□□ -1.43
SMAD6O43541 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SMAD6O43541 CDY11P-201ENST00000447168 1651 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 AC006511.3-201ENST00000624929 1783 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.13□□□□□ -1.43
SMAD6O43541 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SMAD6O43541 AC027279.4-201ENST00000624371 2072 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SMAD6O43541 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.13□□□□□ -1.43
SMAD6O43541 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SMAD6O43541 RNA5SP514-201ENST00000363717 111 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC073310.1-201ENST00000423226 1033 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.13□□□□□ -1.43
SMAD6O43541 CDY8P-201ENST00000428380 1279 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.13□□□□□ -1.43
SMAD6O43541 RSL24D1P8-201ENST00000434442 492 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC013410.1-201ENST00000436223 1232 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.13□□□□□ -1.43
SMAD6O43541 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SMAD6O43541 AL161722.1-201ENST00000446972 1032 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 CDY20P-201ENST00000447528 1279 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC135999.1-201ENST00000478962 479 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SMAD6O43541 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.13□□□□□ -1.43
SMAD6O43541 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.13□□□□□ -1.43
SMAD6O43541 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.13□□□□□ -1.43
SMAD6O43541 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC090236.2-201ENST00000587933 1101 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 ADAD1P2-201ENST00000588476 646 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC027334.1-201ENST00000603257 310 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 AC048344.4-201ENST00000619744 527 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.13□□□□□ -1.43
SMAD6O43541 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.13□□□□□ -1.43
SMAD6O43541 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC129915.3-201ENST00000634128 948 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SMAD6O43541 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.13□□□□□ -1.43
SMAD6O43541 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.13□□□□□ -1.43
SMAD6O43541 SHQ1P1-201ENST00000437111 1544 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SMAD6O43541 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.13□□□□□ -1.43
SMAD6O43541 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.13□□□□□ -1.43
SMAD6O43541 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.13□□□□□ -1.43
SMAD6O43541 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMAD6O43541 GTF2IP4-201ENST00000453092 2054 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMAD6O43541 AL121768.1-201ENST00000613917 2544 ntBASIC6.13□□□□□ -1.43
SMAD6O43541 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
SMAD6O43541 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SMAD6O43541 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.12□□□□□ -1.43
SMAD6O43541 AL451142.1-201ENST00000375867 775 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 SNRPEP6-201ENST00000407465 277 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 RN7SKP199-201ENST00000410325 305 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AC116036.1-201ENST00000412199 367 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 PTCD2P2-201ENST00000415579 1095 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.12□□□□□ -1.43
SMAD6O43541 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.12□□□□□ -1.43
SMAD6O43541 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 IPPKP1-201ENST00000422501 768 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 NDUFS5P5-201ENST00000437256 321 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 RBPJP7-201ENST00000442803 1447 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 MTCO3P17-201ENST00000443775 513 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 RBPJP5-201ENST00000449433 1447 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 RPL23AP60-201ENST00000450011 454 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.12□□□□□ -1.43
SMAD6O43541 GNL2P1-201ENST00000451274 2190 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AC114728.1-201ENST00000488289 483 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms