Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 RN7SL178P-201ENST00000582930 304 ntBASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AC010323.2-201ENST00000596405 594 ntBASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AC114477.1-201ENST00000605097 605 ntBASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AP001437.1-201ENST00000608783 456 ntBASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AL392088.2-201ENST00000637607 285 ntBASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 AP002800.1-201ENST00000624982 2225 ntBASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.14□□□□□ -1.11
TMEM88BA6NKF7 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AL139805.2-201ENST00000455305 2433 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC016930.1-201ENST00000468766 2205 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 PPIAP22-201ENST00000358455 498 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 Y_RNA.194-201ENST00000363985 102 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AL590084.2-201ENST00000401481 382 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 HMGB3P18-201ENST00000406327 590 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AL035422.1-201ENST00000414193 397 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC098592.1-201ENST00000419352 333 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 RPL36P1-201ENST00000419720 225 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 RPSAP65-201ENST00000429660 595 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC010153.1-201ENST00000432862 727 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AL954705.1-201ENST00000435277 559 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 ELOCP8-201ENST00000439309 332 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AL353093.1-201ENST00000441292 436 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 ELOCP15-201ENST00000442090 332 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 USP9YP10-201ENST00000454868 628 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 NXT1P1-201ENST00000458481 316 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC011979.1-201ENST00000472300 483 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC091959.2-201ENST00000477363 321 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 RN7SL797P-201ENST00000486314 297 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 RPS26P24-201ENST00000497656 331 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC008885.2-201ENST00000509506 930 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 USP9YP5-201ENST00000511770 630 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AP000619.3-201ENST00000535634 1127 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 ACTR3BP3-201ENST00000565577 979 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC068790.7-201ENST00000602347 528 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC245297.2-201ENST00000610119 565 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC107075.1-201ENST00000613695 314 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 VN1R7P-201ENST00000619242 903 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC022509.4-201ENST00000621404 572 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC007342.8-201ENST00000623278 678 ntBASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TMEM88BA6NKF7 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms