Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RAI2Q9Y5P3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.96■□□□□ 0.79
RAI2Q9Y5P3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAI2Q9Y5P3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
RAI2Q9Y5P3 TFP1-202ENST00000475455 1573 ntBASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 MIR4497-201ENST00000583208 89 ntBASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 MTDHP1-201ENST00000605323 784 ntBASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 AC009237.14-201ENST00000609975 1594 ntBASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.95■□□□□ 0.78
RAI2Q9Y5P3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 TMEM179-206ENST00000616017 1645 ntBASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAI2Q9Y5P3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 KRT18P21-201ENST00000515767 1272 ntBASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAI2Q9Y5P3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 RN7SL471P-201ENST00000580476 299 ntBASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.92■□□□□ 0.78
RAI2Q9Y5P3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAI2Q9Y5P3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms