Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 KRASP1-201ENST00000407852 552 ntBASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 AC239809.2-201ENST00000415381 517 ntBASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 AC142381.4-202ENST00000563973 229 ntBASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 AC009237.14-201ENST00000609975 1594 ntBASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGC4Q9Y5F7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 AL158047.1-201ENST00000445918 881 ntBASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 AC124016.1-201ENST00000609552 612 ntBASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 AL359736.2-201ENST00000621992 437 ntBASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGC4Q9Y5F7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 GCSHP5-201ENST00000443090 522 ntBASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 AP006587.1-201ENST00000534129 1502 ntBASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 AFG3L1P-217ENST00000557444 2447 ntBASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGC4Q9Y5F7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 TMEM179-206ENST00000616017 1645 ntBASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 NBPF21P-201ENST00000425093 1451 ntBASIC19.88■□□□□ 0.77
PCDHGC4Q9Y5F7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms