Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.92■□□□□ 0.78
MBD1Q9UIS9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MBD1Q9UIS9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 AC113347.1-201ENST00000413321 391 ntBASIC19.91■□□□□ 0.78
MBD1Q9UIS9 NIFKP9-201ENST00000419265 221 ntBASIC19.91■□□□□ 0.78
MBD1Q9UIS9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 FITM1-202ENST00000559294 800 ntBASIC19.91■□□□□ 0.78
MBD1Q9UIS9 AC010947.1-201ENST00000623454 693 ntBASIC19.91■□□□□ 0.78
MBD1Q9UIS9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD1Q9UIS9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 GABARAPL3-202ENST00000624044 1851 ntBASIC19.9■□□□□ 0.78
MBD1Q9UIS9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 HLA-G-202ENST00000376815 851 ntBASIC19.9■□□□□ 0.78
MBD1Q9UIS9 HLA-G-203ENST00000376818 1127 ntBASIC19.9■□□□□ 0.78
MBD1Q9UIS9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 KSR1P1-201ENST00000446298 240 ntBASIC19.9■□□□□ 0.78
MBD1Q9UIS9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 NAPSB-206ENST00000562112 1266 ntBASIC19.9■□□□□ 0.78
MBD1Q9UIS9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD1Q9UIS9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.89■□□□□ 0.78
MBD1Q9UIS9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.89■□□□□ 0.78
MBD1Q9UIS9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD1Q9UIS9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 AL162377.1-201ENST00000618844 1793 ntBASIC19.88■□□□□ 0.77
MBD1Q9UIS9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 KRT16P1-201ENST00000399124 1418 ntBASIC19.88■□□□□ 0.77
MBD1Q9UIS9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 TERF1P1-201ENST00000311003 1181 ntBASIC19.88■□□□□ 0.77
MBD1Q9UIS9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.88■□□□□ 0.77
MBD1Q9UIS9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD1Q9UIS9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.87■□□□□ 0.77
MBD1Q9UIS9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD1Q9UIS9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.87■□□□□ 0.77
MBD1Q9UIS9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms