Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 TREX1-205ENST00000625293 1783 ntBASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCF3Q9NUQ8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 AC243732.1-201ENST00000612648 864 ntBASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 AC013268.1-206ENST00000638368 961 ntBASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 AC112229.1-201ENST00000639295 961 ntBASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCF3Q9NUQ8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 AC007322.3-201ENST00000426526 701 ntBASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 AC007322.1-201ENST00000426983 750 ntBASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 CDV3P1-201ENST00000471403 739 ntBASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.96■□□□□ 0.79
ABCF3Q9NUQ8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.95■□□□□ 0.79
ABCF3Q9NUQ8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 AL049812.1-201ENST00000432563 2267 ntBASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 Z82202.1-201ENST00000623446 1880 ntBASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 AC073111.5-205ENST00000641717 521 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms