Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM2Q9C040 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM2Q9C040 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRIM2Q9C040 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 TREX1-205ENST00000625293 1783 ntBASIC18.12■□□□□ 0.49
TRIM2Q9C040 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM2Q9C040 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM2Q9C040 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM2Q9C040 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 CD99P1-205ENST00000527459 561 ntBASIC18.1■□□□□ 0.49
TRIM2Q9C040 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM2Q9C040 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM2Q9C040 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM2Q9C040 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM2Q9C040 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM2Q9C040 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 AC073210.2-201ENST00000430369 194 ntBASIC18.09■□□□□ 0.49
TRIM2Q9C040 AC069152.1-201ENST00000438030 544 ntBASIC18.09■□□□□ 0.49
TRIM2Q9C040 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM2Q9C040 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM2Q9C040 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM2Q9C040 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM2Q9C040 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM2Q9C040 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.08■□□□□ 0.49
TRIM2Q9C040 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM2Q9C040 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM2Q9C040 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM2Q9C040 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM2Q9C040 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM2Q9C040 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TRIM2Q9C040 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM2Q9C040 ABHD17AP1-201ENST00000358206 933 ntBASIC18.08■□□□□ 0.48
TRIM2Q9C040 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms