Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AL138781.2-201ENST00000617896 1843 ntBASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 AP004607.4-201ENST00000530158 1459 ntBASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
LCE3DQ9BYE3 AC009237.3-201ENST00000393279 1427 ntBASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 AC010525.1-201ENST00000585559 441 ntBASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 TREX1-205ENST00000625293 1783 ntBASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 AL691432.2-201ENST00000607222 2038 ntBASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms