Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 AC010947.1-201ENST00000623454 693 ntBASIC20.6■□□□□ 0.89
LRRC3Q9BY71 AL031985.4-201ENST00000642138 673 ntBASIC20.6■□□□□ 0.89
LRRC3Q9BY71 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.6■□□□□ 0.89
LRRC3Q9BY71 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 RN7SL850P-201ENST00000579959 291 ntBASIC20.59■□□□□ 0.89
LRRC3Q9BY71 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRRC3Q9BY71 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.58■□□□□ 0.89
LRRC3Q9BY71 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC3Q9BY71 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRC3Q9BY71 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC3Q9BY71 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRC3Q9BY71 AC004980.1-204ENST00000429707 299 ntBASIC20.58■□□□□ 0.89
LRRC3Q9BY71 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.58■□□□□ 0.89
LRRC3Q9BY71 AC026271.3-201ENST00000571884 352 ntBASIC20.58■□□□□ 0.89
LRRC3Q9BY71 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.58■□□□□ 0.89
LRRC3Q9BY71 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC3Q9BY71 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
LRRC3Q9BY71 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
LRRC3Q9BY71 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC3Q9BY71 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC3Q9BY71 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 TUBB8P6-201ENST00000436895 1288 ntBASIC20.57■□□□□ 0.88
LRRC3Q9BY71 AC011506.1-201ENST00000474329 610 ntBASIC20.57■□□□□ 0.88
LRRC3Q9BY71 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3Q9BY71 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 TMPOP1-202ENST00000424642 1267 ntBASIC20.56■□□□□ 0.88
LRRC3Q9BY71 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3Q9BY71 LINC01568-207ENST00000641790 1380 ntBASIC20.56■□□□□ 0.88
LRRC3Q9BY71 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms