Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.41■□□□□ 0.7
CCM2Q9BSQ5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCM2Q9BSQ5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCM2Q9BSQ5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCM2Q9BSQ5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCM2Q9BSQ5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CCM2Q9BSQ5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.39■□□□□ 0.69
CCM2Q9BSQ5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 PCDHAC2-203ENST00000615316 3011 ntBASIC19.38■□□□□ 0.69
CCM2Q9BSQ5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 AP006587.1-201ENST00000534129 1502 ntBASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.37■□□□□ 0.69
CCM2Q9BSQ5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms