Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.74■□□□□ 0.91
SMOQ99835 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.74■□□□□ 0.91
SMOQ99835 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.73■□□□□ 0.91
SMOQ99835 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SMOQ99835 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.73■□□□□ 0.91
SMOQ99835 AL596275.1-201ENST00000423464 877 ntBASIC20.73■□□□□ 0.91
SMOQ99835 AC012618.2-201ENST00000428058 849 ntBASIC20.73■□□□□ 0.91
SMOQ99835 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.73■□□□□ 0.91
SMOQ99835 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.73■□□□□ 0.91
SMOQ99835 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.73■□□□□ 0.91
SMOQ99835 TMEM179-206ENST00000616017 1645 ntBASIC20.73■□□□□ 0.91
SMOQ99835 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SMOQ99835 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.73■□□□□ 0.91
SMOQ99835 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.73■□□□□ 0.91
SMOQ99835 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.73■□□□□ 0.91
SMOQ99835 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SMOQ99835 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.73■□□□□ 0.91
SMOQ99835 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMOQ99835 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.72■□□□□ 0.91
SMOQ99835 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.72■□□□□ 0.91
SMOQ99835 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.72■□□□□ 0.91
SMOQ99835 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SMOQ99835 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SMOQ99835 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.72■□□□□ 0.91
SMOQ99835 MIR718-201ENST00000390190 70 ntBASIC20.72■□□□□ 0.91
SMOQ99835 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.72■□□□□ 0.91
SMOQ99835 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.72■□□□□ 0.91
SMOQ99835 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMOQ99835 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.72■□□□□ 0.91
SMOQ99835 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SMOQ99835 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMOQ99835 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.71■□□□□ 0.91
SMOQ99835 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMOQ99835 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMOQ99835 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMOQ99835 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMOQ99835 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.71■□□□□ 0.91
SMOQ99835 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.71■□□□□ 0.91
SMOQ99835 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.71■□□□□ 0.91
SMOQ99835 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.71■□□□□ 0.91
SMOQ99835 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMOQ99835 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SMOQ99835 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.71■□□□□ 0.91
SMOQ99835 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SMOQ99835 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMOQ99835 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMOQ99835 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SMOQ99835 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
SMOQ99835 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SMOQ99835 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.7■□□□□ 0.9
SMOQ99835 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMOQ99835 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMOQ99835 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMOQ99835 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SMOQ99835 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.7■□□□□ 0.9
SMOQ99835 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMOQ99835 AF186192.3-201ENST00000583427 947 ntBASIC20.7■□□□□ 0.9
SMOQ99835 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.7■□□□□ 0.9
SMOQ99835 AC113410.3-201ENST00000623366 203 ntBASIC20.7■□□□□ 0.9
SMOQ99835 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.7■□□□□ 0.9
SMOQ99835 AL049637.2-201ENST00000641778 930 ntBASIC20.7■□□□□ 0.9
SMOQ99835 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SMOQ99835 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMOQ99835 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMOQ99835 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
SMOQ99835 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMOQ99835 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SMOQ99835 AL135905.2-201ENST00000584934 1404 ntBASIC20.7■□□□□ 0.9
SMOQ99835 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms