Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC26.43■■□□□ 1.82
ABCA3Q99758 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC26.43■■□□□ 1.82
ABCA3Q99758 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.43■■□□□ 1.82
ABCA3Q99758 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
ABCA3Q99758 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ABCA3Q99758 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ABCA3Q99758 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.43■■□□□ 1.82
ABCA3Q99758 DPP3P2-201ENST00000416030 1696 ntBASIC26.43■■□□□ 1.82
ABCA3Q99758 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC26.43■■□□□ 1.82
ABCA3Q99758 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
ABCA3Q99758 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA3Q99758 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA3Q99758 DERL1-203ENST00000419562 918 ntTSL 2 BASIC26.42■■□□□ 1.82
ABCA3Q99758 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC26.42■■□□□ 1.82
ABCA3Q99758 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC26.42■■□□□ 1.82
ABCA3Q99758 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC26.42■■□□□ 1.82
ABCA3Q99758 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC26.42■■□□□ 1.82
ABCA3Q99758 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC26.42■■□□□ 1.82
ABCA3Q99758 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC26.42■■□□□ 1.82
ABCA3Q99758 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA3Q99758 ATP5G2P1-201ENST00000433580 426 ntBASIC26.42■■□□□ 1.82
ABCA3Q99758 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA3Q99758 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ABCA3Q99758 AL353719.1-201ENST00000566847 864 ntBASIC26.42■■□□□ 1.82
ABCA3Q99758 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
ABCA3Q99758 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC26.42■■□□□ 1.82
ABCA3Q99758 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
ABCA3Q99758 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCA3Q99758 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
ABCA3Q99758 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCA3Q99758 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ABCA3Q99758 FXN-203ENST00000396366 922 ntTSL 2 BASIC26.41■■□□□ 1.82
ABCA3Q99758 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ABCA3Q99758 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC26.41■■□□□ 1.82
ABCA3Q99758 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC26.41■■□□□ 1.82
ABCA3Q99758 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC26.41■■□□□ 1.82
ABCA3Q99758 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA3Q99758 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA3Q99758 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA3Q99758 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA3Q99758 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC26.4■■□□□ 1.82
ABCA3Q99758 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA3Q99758 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC26.4■■□□□ 1.82
ABCA3Q99758 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC26.4■■□□□ 1.82
ABCA3Q99758 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC26.4■■□□□ 1.82
ABCA3Q99758 IRF5-214ENST00000613821 595 ntTSL 5 BASIC26.4■■□□□ 1.82
ABCA3Q99758 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC26.4■■□□□ 1.82
ABCA3Q99758 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA3Q99758 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
ABCA3Q99758 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA3Q99758 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
ABCA3Q99758 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC26.4■■□□□ 1.82
ABCA3Q99758 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.4■■□□□ 1.82
ABCA3Q99758 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
ABCA3Q99758 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA3Q99758 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCA3Q99758 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA3Q99758 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA3Q99758 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA3Q99758 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC26.39■■□□□ 1.82
ABCA3Q99758 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA3Q99758 HYMAI.1-201ENST00000620949 238 ntBASIC26.39■■□□□ 1.82
ABCA3Q99758 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA3Q99758 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC26.39■■□□□ 1.82
ABCA3Q99758 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA3Q99758 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC26.39■■□□□ 1.82
ABCA3Q99758 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
ABCA3Q99758 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA3Q99758 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA3Q99758 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ABCA3Q99758 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
ABCA3Q99758 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ABCA3Q99758 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ABCA3Q99758 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ABCA3Q99758 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
ABCA3Q99758 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC26.39■■□□□ 1.81
ABCA3Q99758 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ABCA3Q99758 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ABCA3Q99758 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC26.39■■□□□ 1.81
ABCA3Q99758 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC26.39■■□□□ 1.81
ABCA3Q99758 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC26.39■■□□□ 1.81
ABCA3Q99758 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.39■■□□□ 1.81
ABCA3Q99758 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
ABCA3Q99758 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ABCA3Q99758 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.38■■□□□ 1.81
ABCA3Q99758 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ABCA3Q99758 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
ABCA3Q99758 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ABCA3Q99758 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ABCA3Q99758 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC26.38■■□□□ 1.81
ABCA3Q99758 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
ABCA3Q99758 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.38■■□□□ 1.81
ABCA3Q99758 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ABCA3Q99758 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ABCA3Q99758 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
ABCA3Q99758 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
ABCA3Q99758 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA3Q99758 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA3Q99758 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ABCA3Q99758 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms