Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 AC211486.1-202ENST00000416371 468 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 AC112907.2-201ENST00000448639 330 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 DNAJB3-202ENST00000449667 1266 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 AC211476.1-201ENST00000503899 468 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 AC190387.1-201ENST00000551683 408 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 C1QL1P1-201ENST00000568105 661 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 MIR6752-201ENST00000618442 71 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 AC063926.2-201ENST00000623766 1308 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 AC137767.1-201ENST00000602918 1920 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 SLC25A6P5-201ENST00000435663 894 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 GAPDHP21-201ENST00000450301 1010 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 AC142086.6-201ENST00000621154 1765 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 ECEL1P1-201ENST00000373592 1742 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMCN1Q96RW7 AL008721.1-201ENST00000609964 604 ntBASIC6.07□□□□□ -1.44
HMCN1Q96RW7 DUSP8P4-201ENST00000399538 1761 ntBASIC6.06□□□□□ -1.44
HMCN1Q96RW7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 BX276092.5-203ENST00000456199 560 ntBASIC6.06□□□□□ -1.44
HMCN1Q96RW7 RPL13AP23-201ENST00000480739 586 ntBASIC6.06□□□□□ -1.44
HMCN1Q96RW7 AC073648.2-201ENST00000510116 352 ntBASIC6.06□□□□□ -1.44
HMCN1Q96RW7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 SAPCD2P3-201ENST00000455031 850 ntBASIC6.06□□□□□ -1.44
HMCN1Q96RW7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 SPCS2P1-201ENST00000561636 679 ntBASIC6.06□□□□□ -1.44
HMCN1Q96RW7 LINC01711-201ENST00000598340 967 ntBASIC6.06□□□□□ -1.44
HMCN1Q96RW7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC6.06□□□□□ -1.44
HMCN1Q96RW7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 KRT8P36-201ENST00000489121 1440 ntBASIC6.06□□□□□ -1.44
HMCN1Q96RW7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMCN1Q96RW7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms