Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 AC004408.2-201ENST00000623613 2777 ntBASIC14.85□□□□□ -0.03
AP1S3Q96PC3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 AC053503.5-201ENST00000601508 636 ntBASIC14.85□□□□□ -0.03
AP1S3Q96PC3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S3Q96PC3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S3Q96PC3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms