Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC138Q96M89 AC112907.3-201ENST00000577781 2400 ntBASIC19.45■□□□□ 0.7
CCDC138Q96M89 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
CCDC138Q96M89 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC138Q96M89 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC138Q96M89 AC090340.1-201ENST00000620778 4980 ntBASIC19.45■□□□□ 0.7
CCDC138Q96M89 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC138Q96M89 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC138Q96M89 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC138Q96M89 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.45■□□□□ 0.7
CCDC138Q96M89 AC142086.2-201ENST00000569753 217 ntBASIC19.45■□□□□ 0.7
CCDC138Q96M89 MYC-209ENST00000641252 345 ntBASIC19.45■□□□□ 0.7
CCDC138Q96M89 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC138Q96M89 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC138Q96M89 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC138Q96M89 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC138Q96M89 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC138Q96M89 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC138Q96M89 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC138Q96M89 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC138Q96M89 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC138Q96M89 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC138Q96M89 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC138Q96M89 PCDHAC2-203ENST00000615316 3011 ntBASIC19.43■□□□□ 0.7
CCDC138Q96M89 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC138Q96M89 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC138Q96M89 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC138Q96M89 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC138Q96M89 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC138Q96M89 AC069152.1-201ENST00000438030 544 ntBASIC19.43■□□□□ 0.7
CCDC138Q96M89 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC138Q96M89 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC138Q96M89 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCDC138Q96M89 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC138Q96M89 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC138Q96M89 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC138Q96M89 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC138Q96M89 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 AL020996.1-203ENST00000536896 2307 ntBASIC19.42■□□□□ 0.7
CCDC138Q96M89 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC138Q96M89 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC138Q96M89 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC138Q96M89 AL355802.2-201ENST00000402069 882 ntBASIC19.42■□□□□ 0.7
CCDC138Q96M89 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC138Q96M89 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC138Q96M89 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC138Q96M89 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC138Q96M89 AL691432.2-201ENST00000607222 2038 ntBASIC19.42■□□□□ 0.7
CCDC138Q96M89 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC138Q96M89 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC138Q96M89 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CCDC138Q96M89 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC138Q96M89 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms