Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00479Q96M42 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00479Q96M42 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00479Q96M42 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00479Q96M42 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00479Q96M42 CROCCP3-202ENST00000420820 1947 ntBASIC15.04■□□□□ -0
LINC00479Q96M42 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.03■□□□□ -0
LINC00479Q96M42 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LINC00479Q96M42 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LINC00479Q96M42 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.03■□□□□ -0
LINC00479Q96M42 AC096631.2-201ENST00000436136 790 ntBASIC15.03■□□□□ -0
LINC00479Q96M42 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
LINC00479Q96M42 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 AC105265.2-201ENST00000467189 838 ntBASIC15.03■□□□□ -0
LINC00479Q96M42 AF213884.3-201ENST00000563833 479 ntBASIC15.03■□□□□ -0
LINC00479Q96M42 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.03■□□□□ -0
LINC00479Q96M42 AP001160.3-201ENST00000601484 763 ntBASIC15.03■□□□□ -0
LINC00479Q96M42 AC104187.1-201ENST00000607510 612 ntBASIC15.03■□□□□ -0
LINC00479Q96M42 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.03■□□□□ -0
LINC00479Q96M42 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.03■□□□□ -0
LINC00479Q96M42 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
LINC00479Q96M42 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.03■□□□□ -0
LINC00479Q96M42 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.03■□□□□ -0
LINC00479Q96M42 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
LINC00479Q96M42 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LINC00479Q96M42 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00479Q96M42 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 RBM17P2-201ENST00000616397 1405 ntBASIC15.02■□□□□ -0
LINC00479Q96M42 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
LINC00479Q96M42 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.02■□□□□ -0
LINC00479Q96M42 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LINC00479Q96M42 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 IRS3P-201ENST00000223076 1006 ntBASIC15.02■□□□□ -0
LINC00479Q96M42 EDA-201ENST00000338901 1233 ntBASIC15.02■□□□□ -0
LINC00479Q96M42 MIR939-201ENST00000401314 82 ntBASIC15.02■□□□□ -0
LINC00479Q96M42 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00479Q96M42 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.02■□□□□ -0
LINC00479Q96M42 AC106739.1-201ENST00000617035 715 ntBASIC15.02■□□□□ -0
LINC00479Q96M42 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.02■□□□□ -0
LINC00479Q96M42 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LINC00479Q96M42 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00479Q96M42 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.02□□□□□ -0.01
LINC00479Q96M42 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
LINC00479Q96M42 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00479Q96M42 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LINC00479Q96M42 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00479Q96M42 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00479Q96M42 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.02□□□□□ -0.01
LINC00479Q96M42 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00479Q96M42 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00479Q96M42 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00479Q96M42 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00479Q96M42 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00479Q96M42 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.02□□□□□ -0.01
LINC00479Q96M42 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 AC009113.1-201ENST00000570267 2443 ntBASIC15.01□□□□□ -0.01
LINC00479Q96M42 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms