Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 CYP2D8P-201ENST00000433633 1490 ntBASIC19.79■□□□□ 0.76
SIPA1Q96FS4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.78■□□□□ 0.76
SIPA1Q96FS4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 AC026271.3-201ENST00000571884 352 ntBASIC19.78■□□□□ 0.76
SIPA1Q96FS4 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.78■□□□□ 0.76
SIPA1Q96FS4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 AC092865.7-201ENST00000641832 219 ntBASIC19.78■□□□□ 0.76
SIPA1Q96FS4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.78■□□□□ 0.76
SIPA1Q96FS4 KRT18P22-201ENST00000402024 1347 ntBASIC19.77■□□□□ 0.76
SIPA1Q96FS4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 SMG8-203ENST00000578922 2178 ntBASIC19.77■□□□□ 0.76
SIPA1Q96FS4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 AC010947.1-201ENST00000623454 693 ntBASIC19.77■□□□□ 0.76
SIPA1Q96FS4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.77■□□□□ 0.76
SIPA1Q96FS4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SIPA1Q96FS4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.77■□□□□ 0.75
SIPA1Q96FS4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 AC005521.1-201ENST00000393351 872 ntBASIC19.76■□□□□ 0.75
SIPA1Q96FS4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 AC131212.4-201ENST00000623606 975 ntBASIC19.76■□□□□ 0.75
SIPA1Q96FS4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.76■□□□□ 0.75
SIPA1Q96FS4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIPA1Q96FS4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIPA1Q96FS4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SIPA1Q96FS4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.74■□□□□ 0.75
SIPA1Q96FS4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms