Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 PRKY-204ENST00000533551 1019 ntBASIC16.61■□□□□ 0.25
NEIL1Q96FI4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEIL1Q96FI4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 AL121906.2-201ENST00000621597 723 ntBASIC16.6■□□□□ 0.25
NEIL1Q96FI4 FAM197Y4-202ENST00000622692 608 ntBASIC16.6■□□□□ 0.25
NEIL1Q96FI4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 KRT16P6-202ENST00000425692 1426 ntBASIC16.6■□□□□ 0.25
NEIL1Q96FI4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEIL1Q96FI4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 RPPH1-201ENST00000516869 333 ntBASIC16.59■□□□□ 0.25
NEIL1Q96FI4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 MTDHP1-201ENST00000605323 784 ntBASIC16.59■□□□□ 0.25
NEIL1Q96FI4 AL121829.2-201ENST00000620908 328 ntBASIC16.59■□□□□ 0.25
NEIL1Q96FI4 AL359736.2-201ENST00000621992 437 ntBASIC16.59■□□□□ 0.25
NEIL1Q96FI4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEIL1Q96FI4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
NEIL1Q96FI4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
NEIL1Q96FI4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.58■□□□□ 0.25
NEIL1Q96FI4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NEIL1Q96FI4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NEIL1Q96FI4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
NEIL1Q96FI4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
NEIL1Q96FI4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NEIL1Q96FI4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.58■□□□□ 0.25
NEIL1Q96FI4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
NEIL1Q96FI4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NEIL1Q96FI4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.58■□□□□ 0.24
NEIL1Q96FI4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NEIL1Q96FI4 AC239809.2-201ENST00000415381 517 ntBASIC16.58■□□□□ 0.24
NEIL1Q96FI4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.58■□□□□ 0.24
NEIL1Q96FI4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.58■□□□□ 0.24
NEIL1Q96FI4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.58■□□□□ 0.24
NEIL1Q96FI4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEIL1Q96FI4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.58■□□□□ 0.24
NEIL1Q96FI4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms