Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRNP40Q96DI7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRNP40Q96DI7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNRNP40Q96DI7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SNRNP40Q96DI7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SNRNP40Q96DI7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNRNP40Q96DI7 AC005229.4-201ENST00000610085 2198 ntBASIC17.77■□□□□ 0.43
SNRNP40Q96DI7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
SNRNP40Q96DI7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
SNRNP40Q96DI7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNRNP40Q96DI7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 AC018553.1-201ENST00000616682 1458 ntBASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 AC091390.4-202ENST00000476426 537 ntBASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 AC139887.4-201ENST00000607877 719 ntBASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 AC011298.2-201ENST00000617989 482 ntBASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 AC116562.4-202ENST00000641738 218 ntBASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 PLK5-205ENST00000642079 1969 ntBASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRNP40Q96DI7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 RCC2P6-201ENST00000526625 1557 ntBASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 DPP3P2-201ENST00000416030 1696 ntBASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 KRT16P6-202ENST00000425692 1426 ntBASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 RNF152P1-201ENST00000397754 604 ntBASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 FAM8A6P-201ENST00000407496 1135 ntBASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms