Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 AC008622.2-201ENST00000617006 1229 ntBASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM43Q96BQ3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM43Q96BQ3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 VENTXP5-201ENST00000523979 775 ntBASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 AL136038.3-201ENST00000561909 1096 ntBASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 AL512604.3-201ENST00000569583 964 ntBASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM43Q96BQ3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 Z85996.1-201ENST00000494644 937 ntBASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
TRIM43Q96BQ3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 AC244015.2-201ENST00000616358 1861 ntBASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 AC005229.4-201ENST00000610085 2198 ntBASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 AC246785.2-201ENST00000432512 513 ntBASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms