Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS33AQ96AX1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 AL162412.1-201ENST00000567129 965 ntBASIC18.9■□□□□ 0.62
VPS33AQ96AX1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 KRT16P6-202ENST00000425692 1426 ntBASIC18.9■□□□□ 0.62
VPS33AQ96AX1 AC093503.3-201ENST00000624917 2352 ntBASIC18.9■□□□□ 0.62
VPS33AQ96AX1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS33AQ96AX1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VPS33AQ96AX1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
VPS33AQ96AX1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VPS33AQ96AX1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VPS33AQ96AX1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 NTF6G-201ENST00000591094 616 ntBASIC18.89■□□□□ 0.61
VPS33AQ96AX1 AL031963.3-201ENST00000606441 850 ntBASIC18.89■□□□□ 0.61
VPS33AQ96AX1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS33AQ96AX1 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.89■□□□□ 0.61
VPS33AQ96AX1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 AC013268.1-206ENST00000638368 961 ntBASIC18.88■□□□□ 0.61
VPS33AQ96AX1 AC112229.1-201ENST00000639295 961 ntBASIC18.88■□□□□ 0.61
VPS33AQ96AX1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
VPS33AQ96AX1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 KRT8P20-201ENST00000423953 1409 ntBASIC18.87■□□□□ 0.61
VPS33AQ96AX1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 AC007322.4-201ENST00000509611 723 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms