Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 MIR7706-201ENST00000613747 67 ntBASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 AC004980.1-204ENST00000429707 299 ntBASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 AC005225.4-201ENST00000557330 545 ntBASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 NEK4P2-201ENST00000580004 1012 ntBASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 RCC2P6-201ENST00000526625 1557 ntBASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 AP000523.1-201ENST00000398242 1049 ntBASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 HNRNPDP1-201ENST00000439535 754 ntBASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 AC092597.1-201ENST00000487352 616 ntBASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 AL096865.1-201ENST00000606796 927 ntBASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC8.07□□□□□ -1.12
SYNE2Q8WXH0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 MIR770-201ENST00000390219 98 ntBASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 AC007322.3-201ENST00000426526 701 ntBASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 TSPY22P-201ENST00000427496 604 ntBASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 AC034105.1-201ENST00000563488 319 ntBASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYNE2Q8WXH0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms