Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MBD3L1Q8WWY6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
MBD3L1Q8WWY6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.46■□□□□ 0.06
MBD3L1Q8WWY6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
MBD3L1Q8WWY6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.46■□□□□ 0.06
MBD3L1Q8WWY6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.46■□□□□ 0.06
MBD3L1Q8WWY6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 AP001271.2-201ENST00000624018 1556 ntBASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 BX842568.3-201ENST00000418104 571 ntBASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 KRT16P3-201ENST00000439127 1283 ntBASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
MBD3L1Q8WWY6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 AC068880.1-201ENST00000507289 2297 ntBASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 AL512631.2-201ENST00000604634 923 ntBASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 FAM21FP-204ENST00000608637 956 ntBASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 AC093525.10-201ENST00000625130 1569 ntBASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L1Q8WWY6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 IGHV3-19-201ENST00000521488 291 ntBASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 AC105233.4-201ENST00000642045 216 ntBASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 Z98044.1-201ENST00000632503 1764 ntBASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms