Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 CRYGFP-201ENST00000418459 633 ntBASIC18.41■□□□□ 0.54
CT55Q8WUE5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 AC097488.1-201ENST00000507834 756 ntBASIC18.41■□□□□ 0.54
CT55Q8WUE5 C2orf69P3-201ENST00000565542 1120 ntBASIC18.41■□□□□ 0.54
CT55Q8WUE5 AL590326.2-201ENST00000625139 305 ntBASIC18.41■□□□□ 0.54
CT55Q8WUE5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.41■□□□□ 0.54
CT55Q8WUE5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CT55Q8WUE5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 PKD1P6-201ENST00000343738 4769 ntBASIC18.4■□□□□ 0.54
CT55Q8WUE5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CT55Q8WUE5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CT55Q8WUE5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CT55Q8WUE5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.39■□□□□ 0.54
CT55Q8WUE5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CT55Q8WUE5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.39■□□□□ 0.54
CT55Q8WUE5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CT55Q8WUE5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CT55Q8WUE5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CT55Q8WUE5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CT55Q8WUE5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CT55Q8WUE5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.39■□□□□ 0.53
CT55Q8WUE5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CT55Q8WUE5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CT55Q8WUE5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.39■□□□□ 0.53
CT55Q8WUE5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.39■□□□□ 0.53
CT55Q8WUE5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.39■□□□□ 0.53
CT55Q8WUE5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.39■□□□□ 0.53
CT55Q8WUE5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.39■□□□□ 0.53
CT55Q8WUE5 HLA-A-209ENST00000638375 975 ntBASIC18.39■□□□□ 0.53
CT55Q8WUE5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CT55Q8WUE5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CT55Q8WUE5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.39■□□□□ 0.53
CT55Q8WUE5 AC073508.3-201ENST00000619697 1419 ntBASIC18.39■□□□□ 0.53
CT55Q8WUE5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CT55Q8WUE5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CT55Q8WUE5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.39■□□□□ 0.53
CT55Q8WUE5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CT55Q8WUE5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.38■□□□□ 0.53
CT55Q8WUE5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CT55Q8WUE5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CT55Q8WUE5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CT55Q8WUE5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CT55Q8WUE5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.38■□□□□ 0.53
CT55Q8WUE5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.38■□□□□ 0.53
CT55Q8WUE5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.38■□□□□ 0.53
CT55Q8WUE5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CT55Q8WUE5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CT55Q8WUE5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CT55Q8WUE5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CT55Q8WUE5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.38■□□□□ 0.53
CT55Q8WUE5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.38■□□□□ 0.53
CT55Q8WUE5 SLC25A1P4-201ENST00000567977 778 ntBASIC18.38■□□□□ 0.53
CT55Q8WUE5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.38■□□□□ 0.53
CT55Q8WUE5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CT55Q8WUE5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CT55Q8WUE5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.38■□□□□ 0.53
CT55Q8WUE5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CT55Q8WUE5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms