Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC008550.1-201ENST00000511500 884 ntBASIC20.14■□□□□ 0.81
SHROOM3Q8TF72 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.14■□□□□ 0.81
SHROOM3Q8TF72 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.14■□□□□ 0.81
SHROOM3Q8TF72 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.14■□□□□ 0.81
SHROOM3Q8TF72 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 AC006058.3-201ENST00000606217 1069 ntBASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.13■□□□□ 0.81
SHROOM3Q8TF72 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 AC010331.1-201ENST00000611423 582 ntBASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 AC009237.14-201ENST00000609975 1594 ntBASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 AC073912.3-201ENST00000624414 853 ntBASIC20.12■□□□□ 0.81
SHROOM3Q8TF72 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 AC116351.2-201ENST00000606540 1585 ntBASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 AL121829.2-201ENST00000620908 328 ntBASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHROOM3Q8TF72 TFP1-202ENST00000475455 1573 ntBASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 LINC01023-201ENST00000606054 436 ntBASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SHROOM3Q8TF72 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.09■□□□□ 0.81
SHROOM3Q8TF72 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.09■□□□□ 0.81
SHROOM3Q8TF72 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SHROOM3Q8TF72 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHROOM3Q8TF72 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.09■□□□□ 0.81
SHROOM3Q8TF72 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHROOM3Q8TF72 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SHROOM3Q8TF72 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.09■□□□□ 0.81
SHROOM3Q8TF72 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms