Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTRT1Q8TDG2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.54■□□□□ 0.88
ACTRT1Q8TDG2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ACTRT1Q8TDG2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTRT1Q8TDG2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ACTRT1Q8TDG2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTRT1Q8TDG2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 AC023632.3-201ENST00000521633 145 ntBASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTRT1Q8TDG2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ACTRT1Q8TDG2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTRT1Q8TDG2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 AL161938.1-201ENST00000569833 2180 ntBASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ACTRT1Q8TDG2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTRT1Q8TDG2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms