Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD6Q8TD26 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD6Q8TD26 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD6Q8TD26 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD6Q8TD26 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD6Q8TD26 GPX1P2-201ENST00000429271 606 ntBASIC17.92■□□□□ 0.46
CHD6Q8TD26 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.92■□□□□ 0.46
CHD6Q8TD26 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.92■□□□□ 0.46
CHD6Q8TD26 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.92■□□□□ 0.46
CHD6Q8TD26 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.92■□□□□ 0.46
CHD6Q8TD26 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHD6Q8TD26 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD6Q8TD26 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
CHD6Q8TD26 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD6Q8TD26 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD6Q8TD26 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.91■□□□□ 0.46
CHD6Q8TD26 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHD6Q8TD26 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHD6Q8TD26 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.91■□□□□ 0.46
CHD6Q8TD26 SAPCD2P3-201ENST00000455031 850 ntBASIC17.91■□□□□ 0.46
CHD6Q8TD26 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.91■□□□□ 0.46
CHD6Q8TD26 AC104819.1-201ENST00000504587 486 ntBASIC17.91■□□□□ 0.46
CHD6Q8TD26 FOSL1P1-201ENST00000511041 816 ntBASIC17.91■□□□□ 0.46
CHD6Q8TD26 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.91■□□□□ 0.46
CHD6Q8TD26 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD6Q8TD26 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
CHD6Q8TD26 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD6Q8TD26 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.91■□□□□ 0.46
CHD6Q8TD26 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD6Q8TD26 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD6Q8TD26 UPF3AP3-201ENST00000420996 769 ntBASIC17.91■□□□□ 0.46
CHD6Q8TD26 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.91■□□□□ 0.46
CHD6Q8TD26 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.91■□□□□ 0.46
CHD6Q8TD26 AP002414.4-201ENST00000589764 1148 ntBASIC17.91■□□□□ 0.46
CHD6Q8TD26 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHD6Q8TD26 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.91■□□□□ 0.46
CHD6Q8TD26 AL162741.1-201ENST00000565563 1558 ntBASIC17.9■□□□□ 0.46
CHD6Q8TD26 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHD6Q8TD26 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHD6Q8TD26 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHD6Q8TD26 AC138932.3-201ENST00000567634 1902 ntBASIC17.9■□□□□ 0.46
CHD6Q8TD26 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHD6Q8TD26 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHD6Q8TD26 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHD6Q8TD26 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 AC106730.1-201ENST00000566722 1090 ntBASIC17.9■□□□□ 0.46
CHD6Q8TD26 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.9■□□□□ 0.46
CHD6Q8TD26 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHD6Q8TD26 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD6Q8TD26 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 AC131212.4-201ENST00000623606 975 ntBASIC17.89■□□□□ 0.45
CHD6Q8TD26 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD6Q8TD26 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHD6Q8TD26 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHD6Q8TD26 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD6Q8TD26 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHD6Q8TD26 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD6Q8TD26 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHD6Q8TD26 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHD6Q8TD26 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.89■□□□□ 0.45
CHD6Q8TD26 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD6Q8TD26 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD6Q8TD26 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHD6Q8TD26 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHD6Q8TD26 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.88■□□□□ 0.45
CHD6Q8TD26 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD6Q8TD26 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CHD6Q8TD26 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD6Q8TD26 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD6Q8TD26 AC139887.3-201ENST00000568585 713 ntBASIC17.88■□□□□ 0.45
CHD6Q8TD26 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHD6Q8TD26 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHD6Q8TD26 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD6Q8TD26 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.88■□□□□ 0.45
CHD6Q8TD26 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD6Q8TD26 AC068473.5-201ENST00000616428 2072 ntBASIC17.87■□□□□ 0.45
CHD6Q8TD26 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms