Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SRFBP1Q8NEF9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 AL121829.2-201ENST00000620908 328 ntBASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SRFBP1Q8NEF9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 POM121L13P-201ENST00000422362 380 ntBASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 TFP1-202ENST00000475455 1573 ntBASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SRFBP1Q8NEF9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 AP003097.1-201ENST00000530657 1135 ntBASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 PCDHAC2-203ENST00000615316 3011 ntBASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.78■□□□□ 0.6
SRFBP1Q8NEF9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms