Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39CQ8N584 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TTC39CQ8N584 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39CQ8N584 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39CQ8N584 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39CQ8N584 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39CQ8N584 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TTC39CQ8N584 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39CQ8N584 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39CQ8N584 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.98■□□□□ 0.95
TTC39CQ8N584 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.98■□□□□ 0.95
TTC39CQ8N584 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39CQ8N584 NBPF21P-201ENST00000425093 1451 ntBASIC20.98■□□□□ 0.95
TTC39CQ8N584 AC112907.3-201ENST00000577781 2400 ntBASIC20.98■□□□□ 0.95
TTC39CQ8N584 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TTC39CQ8N584 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39CQ8N584 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
TTC39CQ8N584 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39CQ8N584 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39CQ8N584 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39CQ8N584 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39CQ8N584 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39CQ8N584 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 ABHD17AP1-201ENST00000358206 933 ntBASIC20.97■□□□□ 0.95
TTC39CQ8N584 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39CQ8N584 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39CQ8N584 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39CQ8N584 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39CQ8N584 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39CQ8N584 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39CQ8N584 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39CQ8N584 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TTC39CQ8N584 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TTC39CQ8N584 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TTC39CQ8N584 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.96■□□□□ 0.95
TTC39CQ8N584 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.96■□□□□ 0.95
TTC39CQ8N584 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TTC39CQ8N584 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.96■□□□□ 0.95
TTC39CQ8N584 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
TTC39CQ8N584 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.96■□□□□ 0.95
TTC39CQ8N584 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
TTC39CQ8N584 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.96■□□□□ 0.95
TTC39CQ8N584 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.96■□□□□ 0.95
TTC39CQ8N584 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39CQ8N584 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
TTC39CQ8N584 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TTC39CQ8N584 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC39CQ8N584 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC39CQ8N584 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC39CQ8N584 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 KRT18P16-201ENST00000510337 1294 ntBASIC20.95■□□□□ 0.94
TTC39CQ8N584 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 AC110285.5-201ENST00000611501 352 ntBASIC20.95■□□□□ 0.94
TTC39CQ8N584 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.95■□□□□ 0.94
TTC39CQ8N584 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 AL023875.1-201ENST00000640777 796 ntBASIC20.95■□□□□ 0.94
TTC39CQ8N584 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.95■□□□□ 0.94
TTC39CQ8N584 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39CQ8N584 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39CQ8N584 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms