Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
ABCA6Q8N139 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA6Q8N139 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC29.39■■■□□ 2.3
ABCA6Q8N139 ETFA-216ENST00000560726 942 ntTSL 3 BASIC29.39■■■□□ 2.3
ABCA6Q8N139 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA6Q8N139 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA6Q8N139 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA6Q8N139 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
ABCA6Q8N139 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC29.39■■■□□ 2.29
ABCA6Q8N139 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
ABCA6Q8N139 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ABCA6Q8N139 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 PTK2-216ENST00000519881 863 ntTSL 3 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ABCA6Q8N139 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ABCA6Q8N139 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 PHGDH-210ENST00000641115 1638 ntBASIC29.38■■■□□ 2.29
ABCA6Q8N139 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC29.38■■■□□ 2.29
ABCA6Q8N139 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ABCA6Q8N139 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
ABCA6Q8N139 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC29.37■■■□□ 2.29
ABCA6Q8N139 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ABCA6Q8N139 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
ABCA6Q8N139 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ABCA6Q8N139 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
ABCA6Q8N139 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
ABCA6Q8N139 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ABCA6Q8N139 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC29.37■■■□□ 2.29
ABCA6Q8N139 TSPY17P-201ENST00000450329 467 ntBASIC29.37■■■□□ 2.29
ABCA6Q8N139 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC29.37■■■□□ 2.29
ABCA6Q8N139 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC29.37■■■□□ 2.29
ABCA6Q8N139 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC29.37■■■□□ 2.29
ABCA6Q8N139 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC29.37■■■□□ 2.29
ABCA6Q8N139 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
ABCA6Q8N139 AC121338.2-201ENST00000622535 1744 ntBASIC29.37■■■□□ 2.29
ABCA6Q8N139 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
ABCA6Q8N139 DPP3P2-201ENST00000416030 1696 ntBASIC29.37■■■□□ 2.29
ABCA6Q8N139 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ABCA6Q8N139 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
ABCA6Q8N139 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ABCA6Q8N139 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC29.36■■■□□ 2.29
ABCA6Q8N139 AC112907.2-201ENST00000448639 330 ntBASIC29.36■■■□□ 2.29
ABCA6Q8N139 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
ABCA6Q8N139 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
ABCA6Q8N139 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ABCA6Q8N139 LSR-203ENST00000360798 1963 ntTSL 2 BASIC29.36■■■□□ 2.29
ABCA6Q8N139 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
ABCA6Q8N139 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
ABCA6Q8N139 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC29.35■■■□□ 2.29
ABCA6Q8N139 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC29.35■■■□□ 2.29
ABCA6Q8N139 VENTXP5-201ENST00000523979 775 ntBASIC29.35■■■□□ 2.29
ABCA6Q8N139 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC29.35■■■□□ 2.29
ABCA6Q8N139 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
ABCA6Q8N139 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC29.35■■■□□ 2.29
ABCA6Q8N139 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC29.35■■■□□ 2.29
ABCA6Q8N139 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
ABCA6Q8N139 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA6Q8N139 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA6Q8N139 SPDYE13P-201ENST00000445314 798 ntBASIC29.34■■■□□ 2.29
ABCA6Q8N139 AL353719.1-201ENST00000566847 864 ntBASIC29.34■■■□□ 2.29
ABCA6Q8N139 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC29.34■■■□□ 2.29
ABCA6Q8N139 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
ABCA6Q8N139 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA6Q8N139 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA6Q8N139 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA6Q8N139 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
ABCA6Q8N139 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA6Q8N139 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
ABCA6Q8N139 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA6Q8N139 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC29.34■■■□□ 2.29
ABCA6Q8N139 AC246785.2-201ENST00000432512 513 ntBASIC29.34■■■□□ 2.29
ABCA6Q8N139 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
ABCA6Q8N139 AP003041.3-201ENST00000527151 707 ntBASIC29.34■■■□□ 2.29
ABCA6Q8N139 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC29.33■■■□□ 2.29
ABCA6Q8N139 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA6Q8N139 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA6Q8N139 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC29.33■■■□□ 2.29
ABCA6Q8N139 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA6Q8N139 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA6Q8N139 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC29.33■■■□□ 2.29
ABCA6Q8N139 GLRB-205ENST00000512619 728 ntTSL 3 BASIC29.33■■■□□ 2.29
ABCA6Q8N139 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC29.33■■■□□ 2.29
ABCA6Q8N139 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC29.33■■■□□ 2.29
ABCA6Q8N139 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ABCA6Q8N139 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA6Q8N139 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC29.32■■■□□ 2.28
ABCA6Q8N139 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC29.32■■■□□ 2.28
ABCA6Q8N139 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA6Q8N139 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms