Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX60Q8IY21 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC24.45■■□□□ 1.5
DDX60Q8IY21 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.45■■□□□ 1.5
DDX60Q8IY21 AL049597.2-201ENST00000565575 961 ntBASIC24.45■■□□□ 1.5
DDX60Q8IY21 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.45■■□□□ 1.5
DDX60Q8IY21 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.45■■□□□ 1.5
DDX60Q8IY21 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX60Q8IY21 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
DDX60Q8IY21 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.45■■□□□ 1.5
DDX60Q8IY21 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DDX60Q8IY21 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX60Q8IY21 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
DDX60Q8IY21 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.44■■□□□ 1.5
DDX60Q8IY21 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC24.44■■□□□ 1.5
DDX60Q8IY21 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
DDX60Q8IY21 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
DDX60Q8IY21 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
DDX60Q8IY21 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC24.44■■□□□ 1.5
DDX60Q8IY21 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX60Q8IY21 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX60Q8IY21 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DDX60Q8IY21 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX60Q8IY21 AP001271.2-201ENST00000624018 1556 ntBASIC24.44■■□□□ 1.5
DDX60Q8IY21 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DDX60Q8IY21 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.44■■□□□ 1.5
DDX60Q8IY21 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
DDX60Q8IY21 ECEL1P2-202ENST00000465689 757 ntBASIC24.44■■□□□ 1.5
DDX60Q8IY21 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.44■■□□□ 1.5
DDX60Q8IY21 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DDX60Q8IY21 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.43■■□□□ 1.5
DDX60Q8IY21 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX60Q8IY21 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX60Q8IY21 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX60Q8IY21 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX60Q8IY21 KRT18P22-201ENST00000402024 1347 ntBASIC24.43■■□□□ 1.5
DDX60Q8IY21 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX60Q8IY21 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX60Q8IY21 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX60Q8IY21 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX60Q8IY21 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX60Q8IY21 Z85996.1-201ENST00000494644 937 ntBASIC24.43■■□□□ 1.5
DDX60Q8IY21 AC010203.1-204ENST00000548782 407 ntBASIC24.43■■□□□ 1.5
DDX60Q8IY21 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.43■■□□□ 1.5
DDX60Q8IY21 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
DDX60Q8IY21 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DDX60Q8IY21 AC096733.2-201ENST00000609937 1394 ntBASIC24.43■■□□□ 1.5
DDX60Q8IY21 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
DDX60Q8IY21 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DDX60Q8IY21 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
DDX60Q8IY21 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.42■■□□□ 1.5
DDX60Q8IY21 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.42■■□□□ 1.5
DDX60Q8IY21 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.42■■□□□ 1.5
DDX60Q8IY21 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.42■■□□□ 1.5
DDX60Q8IY21 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DDX60Q8IY21 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC24.42■■□□□ 1.5
DDX60Q8IY21 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DDX60Q8IY21 KRT8P8-201ENST00000434750 1448 ntBASIC24.42■■□□□ 1.5
DDX60Q8IY21 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.41■■□□□ 1.5
DDX60Q8IY21 AC097488.1-201ENST00000507834 756 ntBASIC24.41■■□□□ 1.5
DDX60Q8IY21 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.41■■□□□ 1.5
DDX60Q8IY21 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.41■■□□□ 1.5
DDX60Q8IY21 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC24.41■■□□□ 1.5
DDX60Q8IY21 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.41■■□□□ 1.5
DDX60Q8IY21 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
DDX60Q8IY21 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 FEM1AP1-201ENST00000431297 1995 ntBASIC24.41■■□□□ 1.5
DDX60Q8IY21 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
DDX60Q8IY21 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
DDX60Q8IY21 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DDX60Q8IY21 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.41■■□□□ 1.5
DDX60Q8IY21 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC24.41■■□□□ 1.5
DDX60Q8IY21 AC006011.2-201ENST00000621313 1158 ntBASIC24.41■■□□□ 1.5
DDX60Q8IY21 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC24.4■■□□□ 1.5
DDX60Q8IY21 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 AC073314.1-201ENST00000568729 2216 ntBASIC24.4■■□□□ 1.5
DDX60Q8IY21 INGX-201ENST00000359239 846 ntBASIC24.4■■□□□ 1.5
DDX60Q8IY21 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC24.4■■□□□ 1.5
DDX60Q8IY21 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.4■■□□□ 1.5
DDX60Q8IY21 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.4■■□□□ 1.5
DDX60Q8IY21 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms