Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 AL353807.1-201ENST00000427475 662 ntBASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN4BQ8IWT1 KRT17P2-201ENST00000300992 1314 ntBASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 FAM197Y1-201ENST00000421178 764 ntBASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCN4BQ8IWT1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 AL157384.1-201ENST00000445995 2473 ntBASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 MIR4785-201ENST00000585005 73 ntBASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 CD177P1-201ENST00000606252 935 ntBASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SCN4BQ8IWT1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 YBX1P10-201ENST00000444752 975 ntBASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 AC073195.1-201ENST00000607241 877 ntBASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.77■□□□□ 0.92
SCN4BQ8IWT1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SCN4BQ8IWT1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SCN4BQ8IWT1 LINC01006-201ENST00000333319 2292 ntBASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN4BQ8IWT1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms