Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK2Q86Y07 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
VRK2Q86Y07 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.21■□□□□ 0.51
VRK2Q86Y07 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VRK2Q86Y07 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
VRK2Q86Y07 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VRK2Q86Y07 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VRK2Q86Y07 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
VRK2Q86Y07 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VRK2Q86Y07 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.21■□□□□ 0.51
VRK2Q86Y07 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.21■□□□□ 0.51
VRK2Q86Y07 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.21■□□□□ 0.51
VRK2Q86Y07 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VRK2Q86Y07 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VRK2Q86Y07 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
VRK2Q86Y07 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VRK2Q86Y07 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.21■□□□□ 0.51
VRK2Q86Y07 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
VRK2Q86Y07 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.2■□□□□ 0.5
VRK2Q86Y07 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 AC018553.1-201ENST00000616682 1458 ntBASIC18.2■□□□□ 0.5
VRK2Q86Y07 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VRK2Q86Y07 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VRK2Q86Y07 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VRK2Q86Y07 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VRK2Q86Y07 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 GUSBP6-202ENST00000438529 1198 ntBASIC18.19■□□□□ 0.5
VRK2Q86Y07 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VRK2Q86Y07 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VRK2Q86Y07 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VRK2Q86Y07 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VRK2Q86Y07 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VRK2Q86Y07 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.18■□□□□ 0.5
VRK2Q86Y07 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.18■□□□□ 0.5
VRK2Q86Y07 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.18■□□□□ 0.5
VRK2Q86Y07 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK2Q86Y07 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK2Q86Y07 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.18■□□□□ 0.5
VRK2Q86Y07 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VRK2Q86Y07 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VRK2Q86Y07 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VRK2Q86Y07 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.18■□□□□ 0.5
VRK2Q86Y07 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
VRK2Q86Y07 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VRK2Q86Y07 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VRK2Q86Y07 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK2Q86Y07 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
VRK2Q86Y07 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK2Q86Y07 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms