Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 RBM17P2-201ENST00000616397 1405 ntBASIC17.5■□□□□ 0.39
LRRC28Q86X40 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 MIR663A-201ENST00000385250 93 ntBASIC17.5■□□□□ 0.39
LRRC28Q86X40 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 NCF1B-203ENST00000435988 1254 ntBASIC17.5■□□□□ 0.39
LRRC28Q86X40 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.5■□□□□ 0.39
LRRC28Q86X40 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 AC005082.1-201ENST00000413042 2259 ntBASIC17.5■□□□□ 0.39
LRRC28Q86X40 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC28Q86X40 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC28Q86X40 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LRRC28Q86X40 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC28Q86X40 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRRC28Q86X40 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.49■□□□□ 0.39
LRRC28Q86X40 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC28Q86X40 MIR2861-201ENST00000636310 90 ntBASIC17.49■□□□□ 0.39
LRRC28Q86X40 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC28Q86X40 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC28Q86X40 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC28Q86X40 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC28Q86X40 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC28Q86X40 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC28Q86X40 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC28Q86X40 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC28Q86X40 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRRC28Q86X40 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC28Q86X40 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRRC28Q86X40 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC28Q86X40 AC068338.2-201ENST00000563278 1430 ntBASIC17.47■□□□□ 0.39
LRRC28Q86X40 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC28Q86X40 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC28Q86X40 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC28Q86X40 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC28Q86X40 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC28Q86X40 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC28Q86X40 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 GPX1P1-201ENST00000388829 606 ntBASIC17.47■□□□□ 0.39
LRRC28Q86X40 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC28Q86X40 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC28Q86X40 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC28Q86X40 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC28Q86X40 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms