Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 AL032819.2-201ENST00000624543 2162 ntBASIC20.32■□□□□ 0.84
CCDC25Q86WR0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC25Q86WR0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 YBX1P1-201ENST00000445822 960 ntBASIC20.31■□□□□ 0.84
CCDC25Q86WR0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC25Q86WR0 CYP21A1P-202ENST00000354927 1481 ntBASIC20.3■□□□□ 0.84
CCDC25Q86WR0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC25Q86WR0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 PTBP1P-201ENST00000554374 1601 ntBASIC20.29■□□□□ 0.84
CCDC25Q86WR0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC25Q86WR0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC25Q86WR0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms