Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 AC018553.1-201ENST00000616682 1458 ntBASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 AC104771.1-201ENST00000603335 964 ntBASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 AC083880.1-201ENST00000608266 535 ntBASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 AC006557.6-201ENST00000623071 864 ntBASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 AC097658.1-201ENST00000475555 843 ntBASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 AC116351.2-201ENST00000606540 1585 ntBASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF549Q6P9A3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF549Q6P9A3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 AC124283.5-201ENST00000624661 1809 ntBASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 AC142086.2-201ENST00000569753 217 ntBASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 AC093484.2-201ENST00000580996 2166 ntBASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF549Q6P9A3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 AL390719.1-204ENST00000412397 1219 ntBASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
ZNF549Q6P9A3 HLA-B-256ENST00000639848 1089 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms